Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SNORA20B-201ENST00000384220 132 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 SNORD14D-201ENST00000384390 87 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 MIR616-201ENST00000385293 97 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 MT-TT-201ENST00000387460 66 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 MIR873-201ENST00000401120 77 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 MIR1294-201ENST00000408503 142 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.13□□□□□ -2.07
SMAD6O43541 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.13□□□□□ -2.07
SMAD6O43541 HSPE1P21-201ENST00000438283 308 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 RPL23AP7-203ENST00000449021 469 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.13□□□□□ -2.07
SMAD6O43541 AC104435.1-201ENST00000483483 166 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 YWHAEP4-201ENST00000505390 198 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 ATP5EP1-201ENST00000510257 156 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 MIR3684-201ENST00000579779 74 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.13□□□□□ -2.07
SMAD6O43541 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SMAD6O43541 MIR3658-201ENST00000636291 56 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 AC100821.1-201ENST00000523153 2479 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
SMAD6O43541 Y_RNA.229-201ENST00000364347 113 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 RNU4-11P-201ENST00000365287 132 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 RNU6-22P-201ENST00000384355 107 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 SNORD116-13-201ENST00000384408 92 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 MIR300-201ENST00000401138 83 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 RNU6-257P-201ENST00000410238 98 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 RNU2-51P-201ENST00000410708 197 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 RNU6-383P-201ENST00000410864 94 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.12□□□□□ -2.07
SMAD6O43541 AC016717.1-201ENST00000448918 286 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 snoU13.15-201ENST00000459407 104 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 AC117454.1-201ENST00000491120 168 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 CKS1BP2-201ENST00000497342 240 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.12□□□□□ -2.07
SMAD6O43541 AC107027.2-201ENST00000512197 115 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 RNU6-1337P-201ENST00000516525 95 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 IGKV3-31-201ENST00000523109 329 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.12□□□□□ -2.07
SMAD6O43541 MIR548X2-201ENST00000579776 100 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 MIR4753-201ENST00000585119 83 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 U2.20-201ENST00000613956 192 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 AC068647.2-201ENST00000637380 353 ntBASIC2.12□□□□□ -2.07
SMAD6O43541 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.12□□□□□ -2.07
SMAD6O43541 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SMAD6O43541 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMAD6O43541 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMAD6O43541 MIR367-201ENST00000362299 68 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 SNORD114-7-201ENST00000362520 77 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 RNU6-234P-201ENST00000365229 104 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 RNU6-417P-201ENST00000384712 107 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 AL137159.1-201ENST00000452808 512 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 AC010409.1-201ENST00000487382 476 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 SNORA25.12-201ENST00000516202 82 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 RNU6-561P-201ENST00000516222 102 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 RNU7-115P-201ENST00000516433 55 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 AC027419.1-201ENST00000522976 328 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 MIR4724-201ENST00000579485 89 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 AL391903.3-201ENST00000612158 163 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 MIR548AY-201ENST00000617669 107 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 snoZ196.1-201ENST00000625269 89 ntBASIC2.11□□□□□ -2.07
SMAD6O43541 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SMAD6O43541 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SMAD6O43541 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
SMAD6O43541 SNORA27.1-201ENST00000362604 124 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 SNORD114-1-201ENST00000362705 72 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 RNU6-144P-201ENST00000383951 107 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 RNU6-975P-201ENST00000384296 105 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 RNU6-1154P-201ENST00000391001 104 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 RNU6-57P-201ENST00000411348 103 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 AC006461.1-201ENST00000412637 326 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 AL445646.1-201ENST00000431784 216 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 AL121914.1-201ENST00000450188 156 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 SNORD65B-201ENST00000459126 73 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 snoU13.26-201ENST00000459452 105 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 RNU6-221P-201ENST00000459541 99 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 AC114982.1-201ENST00000469402 321 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 RNU6-479P-201ENST00000516348 105 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 RNU6-62P-201ENST00000516526 102 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.1□□□□□ -2.07
SMAD6O43541 DNAJC19P2-201ENST00000593340 302 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 AL365222.1-201ENST00000614661 98 ntBASIC2.1□□□□□ -2.07
SMAD6O43541 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.1□□□□□ -2.07
SMAD6O43541 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SMAD6O43541 AC010332.2-201ENST00000613083 1904 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SMAD6O43541 AL356292.1-201ENST00000283110 373 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 RNU6-1290P-201ENST00000362957 109 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 SNORD31B-201ENST00000364977 69 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 RNU6-407P-201ENST00000365280 104 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 RNA5SP37-201ENST00000365420 130 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 SNORA22C-201ENST00000384614 134 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 MIR15B-201ENST00000385045 98 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SMAD6O43541 AL606845.1-201ENST00000404881 255 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms