Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.34□□□□□ -2.03
PROM1O43490 RNU6-1323P-201ENST00000384025 107 ntBASIC2.34□□□□□ -2.03
PROM1O43490 RNU6-376P-201ENST00000384731 106 ntBASIC2.34□□□□□ -2.03
PROM1O43490 MIR616-201ENST00000385293 97 ntBASIC2.34□□□□□ -2.03
PROM1O43490 MT-TT-201ENST00000387460 66 ntBASIC2.34□□□□□ -2.03
PROM1O43490 SNORA3.2-201ENST00000408221 125 ntBASIC2.34□□□□□ -2.03
PROM1O43490 AC018868.1-201ENST00000491307 315 ntBASIC2.34□□□□□ -2.03
PROM1O43490 SCARNA8-201ENST00000515924 131 ntBASIC2.34□□□□□ -2.03
PROM1O43490 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.34□□□□□ -2.03
PROM1O43490 AC127455.1-201ENST00000565496 145 ntBASIC2.34□□□□□ -2.03
PROM1O43490 AC078899.2-201ENST00000595282 212 ntBASIC2.34□□□□□ -2.03
PROM1O43490 U2.22-201ENST00000636441 106 ntBASIC2.34□□□□□ -2.03
PROM1O43490 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
PROM1O43490 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PROM1O43490 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PROM1O43490 ZNF658B-202ENST00000615961 3375 ntBASIC2.34□□□□□ -2.04
PROM1O43490 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.33□□□□□ -2.04
PROM1O43490 RNU6-449P-201ENST00000383914 107 ntBASIC2.33□□□□□ -2.04
PROM1O43490 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
PROM1O43490 RNU6-417P-201ENST00000384712 107 ntBASIC2.33□□□□□ -2.04
PROM1O43490 SNORA19-201ENST00000384737 128 ntBASIC2.33□□□□□ -2.04
PROM1O43490 EBAG9P1-201ENST00000418955 543 ntBASIC2.33□□□□□ -2.04
PROM1O43490 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.33□□□□□ -2.04
PROM1O43490 AL121914.1-201ENST00000450188 156 ntBASIC2.33□□□□□ -2.04
PROM1O43490 RPL36AP21-201ENST00000490372 323 ntBASIC2.33□□□□□ -2.04
PROM1O43490 AC097462.1-201ENST00000514125 324 ntBASIC2.33□□□□□ -2.04
PROM1O43490 RNU6-406P-201ENST00000516470 107 ntBASIC2.33□□□□□ -2.04
PROM1O43490 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
PROM1O43490 AC015720.1-201ENST00000565251 277 ntBASIC2.33□□□□□ -2.04
PROM1O43490 MIR3126-201ENST00000577443 74 ntBASIC2.33□□□□□ -2.04
PROM1O43490 MIR3910-1-201ENST00000580936 111 ntBASIC2.33□□□□□ -2.04
PROM1O43490 MTND1P7-201ENST00000632801 297 ntBASIC2.33□□□□□ -2.04
PROM1O43490 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PROM1O43490 AL157777.2-201ENST00000258070 137 ntBASIC2.32□□□□□ -2.04
PROM1O43490 RNU1-22P-201ENST00000363334 158 ntBASIC2.32□□□□□ -2.04
PROM1O43490 RNU4-84P-201ENST00000364200 139 ntBASIC2.32□□□□□ -2.04
PROM1O43490 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
PROM1O43490 RNY1P5-201ENST00000383890 115 ntBASIC2.32□□□□□ -2.04
PROM1O43490 AL359511.1-201ENST00000402970 211 ntBASIC2.32□□□□□ -2.04
PROM1O43490 AL606845.1-201ENST00000404881 255 ntBASIC2.32□□□□□ -2.04
PROM1O43490 RNU6-1186P-201ENST00000410429 97 ntBASIC2.32□□□□□ -2.04
PROM1O43490 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.32□□□□□ -2.04
PROM1O43490 AC060773.1-201ENST00000421698 310 ntBASIC2.32□□□□□ -2.04
PROM1O43490 AL162725.1-201ENST00000435405 301 ntBASIC2.32□□□□□ -2.04
PROM1O43490 RNU6-437P-201ENST00000459408 95 ntBASIC2.32□□□□□ -2.04
PROM1O43490 RNU6-1146P-201ENST00000516282 102 ntBASIC2.32□□□□□ -2.04
PROM1O43490 RNA5SP137-201ENST00000516833 135 ntBASIC2.32□□□□□ -2.04
PROM1O43490 AC109810.1-201ENST00000534066 224 ntBASIC2.32□□□□□ -2.04
PROM1O43490 MIR5688-201ENST00000580619 83 ntBASIC2.32□□□□□ -2.04
PROM1O43490 U2.20-201ENST00000613956 192 ntBASIC2.32□□□□□ -2.04
PROM1O43490 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PROM1O43490 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PROM1O43490 MIR340-201ENST00000362125 95 ntBASIC2.31□□□□□ -2.04
PROM1O43490 RNU4-41P-201ENST00000364426 143 ntBASIC2.31□□□□□ -2.04
PROM1O43490 RNU6-117P-201ENST00000365415 107 ntBASIC2.31□□□□□ -2.04
PROM1O43490 SRIP3-201ENST00000413200 219 ntBASIC2.31□□□□□ -2.04
PROM1O43490 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.31□□□□□ -2.04
PROM1O43490 AC005840.1-201ENST00000498412 377 ntBASIC2.31□□□□□ -2.04
PROM1O43490 AC011406.1-201ENST00000512440 370 ntBASIC2.31□□□□□ -2.04
PROM1O43490 RNU6-1041P-201ENST00000516254 102 ntBASIC2.31□□□□□ -2.04
PROM1O43490 AC121758.2-201ENST00000553271 193 ntBASIC2.31□□□□□ -2.04
PROM1O43490 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.31□□□□□ -2.04
PROM1O43490 AL391903.3-201ENST00000612158 163 ntBASIC2.31□□□□□ -2.04
PROM1O43490 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PROM1O43490 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
PROM1O43490 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
PROM1O43490 Y_RNA.580-201ENST00000391004 95 ntBASIC2.3□□□□□ -2.04
PROM1O43490 RN7SKP192-201ENST00000411291 327 ntBASIC2.3□□□□□ -2.04
PROM1O43490 AC006461.1-201ENST00000412637 326 ntBASIC2.3□□□□□ -2.04
PROM1O43490 EDDM3CP-201ENST00000415977 425 ntBASIC2.3□□□□□ -2.04
PROM1O43490 TMSB4XP3-201ENST00000445144 114 ntBASIC2.3□□□□□ -2.04
PROM1O43490 AC107027.2-201ENST00000512197 115 ntBASIC2.3□□□□□ -2.04
PROM1O43490 SNORA31.25-201ENST00000517242 134 ntBASIC2.3□□□□□ -2.04
PROM1O43490 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.3□□□□□ -2.04
PROM1O43490 MIR4431-201ENST00000579990 94 ntBASIC2.3□□□□□ -2.04
PROM1O43490 CTSLP2-204ENST00000629029 392 ntBASIC2.3□□□□□ -2.04
PROM1O43490 AC007336.1-201ENST00000576365 3828 ntBASIC2.3□□□□□ -2.04
PROM1O43490 snoU2-30.2-201ENST00000362805 70 ntBASIC2.29□□□□□ -2.04
PROM1O43490 Y_RNA.99-201ENST00000363138 105 ntBASIC2.29□□□□□ -2.04
PROM1O43490 RNU6-151P-201ENST00000364158 107 ntBASIC2.29□□□□□ -2.04
PROM1O43490 MIR15B-201ENST00000385045 98 ntBASIC2.29□□□□□ -2.04
PROM1O43490 MIR613-201ENST00000385248 95 ntBASIC2.29□□□□□ -2.04
PROM1O43490 RNU6-239P-201ENST00000390990 99 ntBASIC2.29□□□□□ -2.04
PROM1O43490 RNU6-1228P-201ENST00000391014 107 ntBASIC2.29□□□□□ -2.04
PROM1O43490 Y_RNA.621-201ENST00000411065 96 ntBASIC2.29□□□□□ -2.04
PROM1O43490 Z98742.3-201ENST00000418637 326 ntBASIC2.29□□□□□ -2.04
PROM1O43490 RPS4XP11-201ENST00000446897 772 ntBASIC2.29□□□□□ -2.04
PROM1O43490 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
PROM1O43490 U6.73-201ENST00000619194 103 ntBASIC2.29□□□□□ -2.04
PROM1O43490 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PROM1O43490 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
PROM1O43490 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PROM1O43490 SNORD115-3-201ENST00000363100 82 ntBASIC2.28□□□□□ -2.04
PROM1O43490 SNORD114-30-201ENST00000364448 72 ntBASIC2.28□□□□□ -2.04
PROM1O43490 RNU6-728P-201ENST00000365375 104 ntBASIC2.28□□□□□ -2.04
PROM1O43490 SNORA72-201ENST00000384339 132 ntBASIC2.28□□□□□ -2.04
PROM1O43490 RNU6-160P-201ENST00000384591 107 ntBASIC2.28□□□□□ -2.04
PROM1O43490 AL512604.1-201ENST00000404812 257 ntBASIC2.28□□□□□ -2.04
PROM1O43490 MIR1278-201ENST00000408753 81 ntBASIC2.28□□□□□ -2.04
PROM1O43490 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms