Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MIR3646-201ENST00000578301 84 ntBASIC2.67□□□□□ -1.98
FOXN1O15353 MIR4724-201ENST00000579485 89 ntBASIC2.67□□□□□ -1.98
FOXN1O15353 MIR5688-201ENST00000580619 83 ntBASIC2.67□□□□□ -1.98
FOXN1O15353 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.67□□□□□ -1.98
FOXN1O15353 AP001340.1-201ENST00000624405 217 ntBASIC2.67□□□□□ -1.98
FOXN1O15353 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXN1O15353 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
FOXN1O15353 SNORD114-19-201ENST00000363072 75 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 U3.8-201ENST00000363675 217 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 Y_RNA.251-201ENST00000364551 99 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 RNU6-728P-201ENST00000365375 104 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 Y_RNA.521-201ENST00000384560 114 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 RNY4P18-201ENST00000391107 89 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 RNU2-49P-201ENST00000410666 184 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXN1O15353 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXN1O15353 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXN1O15353 RAC1P5-201ENST00000512182 576 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 RNU6-91P-201ENST00000607774 107 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.66□□□□□ -1.98
FOXN1O15353 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXN1O15353 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXN1O15353 AC080100.1-201ENST00000624239 5356 ntBASIC2.66□□□□□ -1.98
FOXN1O15353 Z82195.2-201ENST00000612348 18351 ntBASIC2.65□□□□□ -1.98
FOXN1O15353 AC010889.1-201ENST00000566193 2666 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 MIR367-201ENST00000362299 68 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 RNU6-1298P-201ENST00000362456 101 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 RNU6-144P-201ENST00000383951 107 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 MIR583-201ENST00000384846 75 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 SNORA12-201ENST00000391162 147 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 RNU6-1064P-201ENST00000410626 104 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
FOXN1O15353 HSPE1P21-201ENST00000438283 308 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 RPS27P1-201ENST00000450552 247 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 AC117454.1-201ENST00000491120 168 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 MIR6129-201ENST00000616087 109 ntBASIC2.65□□□□□ -1.99
FOXN1O15353 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
FOXN1O15353 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
FOXN1O15353 snoU2_19.1-201ENST00000362361 80 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 Y_RNA.124-201ENST00000363339 93 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 SNORD114-26-201ENST00000363543 72 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 Y_RNA.294-201ENST00000364916 102 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 Y_RNA.393-201ENST00000383936 102 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 MIR767-201ENST00000390228 109 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 RNA5SP354-201ENST00000391247 136 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 AC104332.2-201ENST00000429959 156 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 AC018634.1-201ENST00000437554 401 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXN1O15353 AL031274.2-201ENST00000599419 203 ntBASIC2.64□□□□□ -1.99
FOXN1O15353 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXN1O15353 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXN1O15353 RNU6-1305P-201ENST00000364353 104 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 RNU6-1082P-201ENST00000364574 107 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 RNU6-915P-201ENST00000364943 103 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 RNU1-138P-201ENST00000384093 164 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 AL512604.1-201ENST00000404812 257 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 SNORA11.4-201ENST00000408823 129 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 SNORA36B-201ENST00000410438 131 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 AP1B1P2-201ENST00000416196 106 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 RPS15AP28-201ENST00000435088 386 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 HSPE1P13-201ENST00000451143 297 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 SNORA70.12-201ENST00000516084 153 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 RNU7-115P-201ENST00000516433 55 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 AC127455.1-201ENST00000565496 145 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 U7.2-201ENST00000607576 63 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 AC068647.2-201ENST00000637380 353 ntBASIC2.63□□□□□ -1.99
FOXN1O15353 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.63□□□□□ -1.99
FOXN1O15353 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXN1O15353 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXN1O15353 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
FOXN1O15353 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
FOXN1O15353 RNU6-655P-201ENST00000362858 107 ntBASIC2.62□□□□□ -1.99
FOXN1O15353 RNU6-1210P-201ENST00000363775 107 ntBASIC2.62□□□□□ -1.99
FOXN1O15353 RNU6-476P-201ENST00000384726 107 ntBASIC2.62□□□□□ -1.99
FOXN1O15353 MIR147B-201ENST00000390185 80 ntBASIC2.62□□□□□ -1.99
FOXN1O15353 MIR1276-201ENST00000408707 83 ntBASIC2.62□□□□□ -1.99
FOXN1O15353 Y_RNA.622-201ENST00000411091 108 ntBASIC2.62□□□□□ -1.99
FOXN1O15353 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXN1O15353 AL441985.1-201ENST00000457727 251 ntBASIC2.62□□□□□ -1.99
FOXN1O15353 AC112771.1-201ENST00000463581 102 ntBASIC2.62□□□□□ -1.99
FOXN1O15353 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXN1O15353 MIR548AY-201ENST00000617669 107 ntBASIC2.62□□□□□ -1.99
FOXN1O15353 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXN1O15353 RNU6-661P-201ENST00000362409 107 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 RNU6-235P-201ENST00000362644 107 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 RNU6-1336P-201ENST00000383886 109 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 RNU6-1144P-201ENST00000384247 104 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 MIR221-201ENST00000385135 110 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 SNORA75.5-201ENST00000391291 81 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 MIR1278-201ENST00000408753 81 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 RNU4-43P-201ENST00000410628 137 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXN1O15353 SNRPGP8-201ENST00000454064 226 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 RPS29P12-201ENST00000460178 152 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 CYCTP-201ENST00000504253 315 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 RN7SKP179-201ENST00000516126 217 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 Y_RNA.712-201ENST00000517011 92 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms