Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 RNU6-1031P-201ENST00000384773 107 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 AL034345.1-201ENST00000407768 123 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 RNU6-121P-201ENST00000410525 99 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.61□□□□□ -2.15
SMAD9O15198 STAG3L5P-204ENST00000443759 179 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.61□□□□□ -2.15
SMAD9O15198 LINC01399-202ENST00000458450 244 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 snoU13.9-201ENST00000458927 103 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 RNU6-1053P-201ENST00000515930 101 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 RNU6-1143P-201ENST00000516125 104 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 RNU6-496P-201ENST00000516145 99 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.61□□□□□ -2.15
SMAD9O15198 AP002004.2-201ENST00000531656 154 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.61□□□□□ -2.15
SMAD9O15198 AC004832.4-201ENST00000608952 331 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 AC095038.3-201ENST00000634439 195 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SMAD9O15198 SNORA1B-201ENST00000362535 133 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 Y_RNA.341-201ENST00000365341 102 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 RNU6-1160P-201ENST00000384546 104 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SMAD9O15198 Y_RNA.621-201ENST00000411065 96 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.6□□□□□ -2.15
SMAD9O15198 RPS20P10-201ENST00000451209 253 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 AL162424.1-201ENST00000602325 221 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 SNORA28-201ENST00000606769 126 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 AC021506.2-201ENST00000612354 169 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 AC084768.2-201ENST00000622736 221 ntBASIC1.6□□□□□ -2.15
SMAD9O15198 Y_RNA.64-201ENST00000362845 102 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 RNU4-80P-201ENST00000363200 141 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 RNU6-806P-201ENST00000365147 105 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.59□□□□□ -2.15
SMAD9O15198 RNU6-338P-201ENST00000383888 105 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 MIR606-201ENST00000384851 96 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 Y_RNA.581-201ENST00000391017 97 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 AC108667.1-201ENST00000428618 249 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 RPS4XP11-201ENST00000446897 772 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 HSPE1P24-201ENST00000450782 238 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 HSPE1P25-201ENST00000455484 251 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 AC098869.1-201ENST00000481627 292 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 SNORA77B-201ENST00000578179 125 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 MIR8063-201ENST00000621930 81 ntBASIC1.59□□□□□ -2.15
SMAD9O15198 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
SMAD9O15198 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SMAD9O15198 Y_RNA.569-201ENST00000384749 103 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 RPL21P38-201ENST00000418090 167 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 AL049830.1-201ENST00000468034 425 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 HMGN1P10-201ENST00000474557 553 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 AC099513.1-201ENST00000490423 301 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 SNORA25.15-201ENST00000516487 89 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 Y_RNA.720-201ENST00000517166 92 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 AP003733.2-201ENST00000529409 171 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.58□□□□□ -2.16
SMAD9O15198 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 AC005972.2-201ENST00000604690 348 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 AC068647.2-201ENST00000637380 353 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.58□□□□□ -2.16
SMAD9O15198 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SMAD9O15198 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SMAD9O15198 ICE2P2-201ENST00000483823 2787 ntBASIC1.58□□□□□ -2.16
SMAD9O15198 Y_RNA.26-201ENST00000362539 101 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 Y_RNA.222-201ENST00000364264 102 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 Y_RNA.310-201ENST00000365063 113 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 RNU6-290P-201ENST00000365212 101 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 Y_RNA.368-201ENST00000365547 113 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 Y_RNA.456-201ENST00000384232 111 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 MIR215-201ENST00000384858 110 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 AC004965.1-201ENST00000413033 213 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.57□□□□□ -2.16
SMAD9O15198 AL731563.1-201ENST00000442202 214 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 RNU7-28P-201ENST00000516759 62 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 AL358944.1-201ENST00000528537 144 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
SMAD9O15198 AC011604.1-201ENST00000545978 196 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 AC024614.2-201ENST00000577584 372 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 MIR4498-201ENST00000577599 66 ntBASIC1.57□□□□□ -2.16
SMAD9O15198 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SMAD9O15198 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
SMAD9O15198 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.56□□□□□ -2.16
SMAD9O15198 snoU2_19.2-201ENST00000363024 80 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 RNU6-1080P-201ENST00000383982 107 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 Y_RNA.418-201ENST00000384029 102 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 RNU6-1248P-201ENST00000391096 64 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 DYNLT3P2-201ENST00000442517 295 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 MTATP8P1-201ENST00000467115 207 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 Y_RNA.673-201ENST00000516306 88 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 MIR3683-201ENST00000580847 82 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 MIR4719-201ENST00000585233 84 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 AC073349.3-201ENST00000617616 186 ntBASIC1.56□□□□□ -2.16
SMAD9O15198 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SMAD9O15198 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SMAD9O15198 MIR378A-201ENST00000362177 66 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 RNU6-1123P-201ENST00000362347 106 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 Y_RNA.541-201ENST00000384640 113 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 MIR194-1-201ENST00000384892 85 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 SNORA12.1-201ENST00000390873 148 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 SNORA53-201ENST00000391141 249 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms