Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.7□□□□□ -2.14
ATP2A1O14983 MIR6079-201ENST00000635807 62 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 AP000648.3-201ENST00000623539 4507 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 AL391987.6-201ENST00000305671 199 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 SNORD113-8-201ENST00000363497 74 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 SNORA7.1-201ENST00000363750 139 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 Y_RNA.214-201ENST00000364201 112 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 Y_RNA.226-201ENST00000364337 114 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 SNORA4.2-201ENST00000365313 147 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.69□□□□□ -2.14
ATP2A1O14983 COX6CP10-201ENST00000416832 224 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 ELOCP20-201ENST00000422460 345 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 AC024067.1-201ENST00000426199 223 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.69□□□□□ -2.14
ATP2A1O14983 SNORA44.1-201ENST00000517031 108 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 AC091178.2-201ENST00000584401 117 ntBASIC1.69□□□□□ -2.14
ATP2A1O14983 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ATP2A1O14983 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ATP2A1O14983 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ATP2A1O14983 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.68□□□□□ -2.14
ATP2A1O14983 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.68□□□□□ -2.14
ATP2A1O14983 MIR126-201ENST00000362291 85 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 Y_RNA.105-201ENST00000363182 111 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 RNU6-414P-201ENST00000363705 104 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 RNU6-770P-201ENST00000363929 105 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 Y_RNA.222-201ENST00000364264 102 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 MIR606-201ENST00000384851 96 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 MIR520G-201ENST00000385064 90 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 RNU6-121P-201ENST00000410525 99 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 AC113618.1-201ENST00000416747 285 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 AL354695.1-201ENST00000427935 228 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 MRPS35P2-201ENST00000508242 191 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 RNU6-496P-201ENST00000516145 99 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 RNU6-341P-201ENST00000516973 96 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.68□□□□□ -2.14
ATP2A1O14983 MIR4709-201ENST00000577272 72 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 MIR3198-2-201ENST00000577868 80 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 DEFB117-201ENST00000602356 141 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 MIR8070-201ENST00000616510 88 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 MIR8054-201ENST00000620877 86 ntBASIC1.68□□□□□ -2.14
ATP2A1O14983 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.68□□□□□ -2.14
ATP2A1O14983 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.68□□□□□ -2.14
ATP2A1O14983 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.68□□□□□ -2.14
ATP2A1O14983 Y_RNA.19-201ENST00000362462 99 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 RNU4-90P-201ENST00000362773 141 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 Y_RNA.286-201ENST00000364813 102 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 Y_RNA.383-201ENST00000383855 97 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
ATP2A1O14983 Y_RNA.581-201ENST00000391017 97 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 Y_RNA.602-201ENST00000410535 92 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 RN7SKP200-201ENST00000410564 320 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.67□□□□□ -2.14
ATP2A1O14983 POLR2KP2-201ENST00000438155 177 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 LINC01399-202ENST00000458450 244 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 AC091021.1-201ENST00000468051 388 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.67□□□□□ -2.14
ATP2A1O14983 RNY3P15-201ENST00000516297 97 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 Y_RNA.673-201ENST00000516306 88 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 SNORA31.10-201ENST00000516482 106 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 RNU6-63P-201ENST00000516690 95 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
ATP2A1O14983 U8.1-201ENST00000362843 134 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 Y_RNA.327-201ENST00000365201 102 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 RNU6-102P-201ENST00000384485 104 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 MIR30A-201ENST00000385092 71 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 MIR1304-201ENST00000408243 91 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 AL162725.1-201ENST00000435405 301 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 JTBP1-201ENST00000441314 247 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 AL731563.1-201ENST00000442202 214 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 HSPE1P25-201ENST00000455484 251 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 RNU7-34P-201ENST00000459394 64 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 Y_RNA.720-201ENST00000517166 92 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 AL929325.1-201ENST00000603096 117 ntBASIC1.66□□□□□ -2.14
ATP2A1O14983 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.66□□□□□ -2.14
ATP2A1O14983 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
ATP2A1O14983 Y_RNA.145-201ENST00000363527 102 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 SNORA63C-201ENST00000364578 129 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 Y_RNA.456-201ENST00000384232 111 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 SNORD116-13-201ENST00000384408 92 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 RNU6-136P-201ENST00000384663 107 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 RNU6-440P-201ENST00000390882 105 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 RNU6-855P-201ENST00000410395 104 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 RNA5SP511-201ENST00000410487 115 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 AC004832.4-201ENST00000608952 331 ntBASIC1.65□□□□□ -2.15
ATP2A1O14983 Y_RNA.267-201ENST00000364679 109 ntBASIC1.64□□□□□ -2.15
ATP2A1O14983 Y_RNA.368-201ENST00000365547 113 ntBASIC1.64□□□□□ -2.15
ATP2A1O14983 RNU6-1031P-201ENST00000384773 107 ntBASIC1.64□□□□□ -2.15
ATP2A1O14983 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.64□□□□□ -2.15
ATP2A1O14983 HMGN1P10-201ENST00000474557 553 ntBASIC1.64□□□□□ -2.15
ATP2A1O14983 RNU6-1096P-201ENST00000517089 102 ntBASIC1.64□□□□□ -2.15
ATP2A1O14983 AL358944.1-201ENST00000528537 144 ntBASIC1.64□□□□□ -2.15
ATP2A1O14983 AP003733.2-201ENST00000529409 171 ntBASIC1.64□□□□□ -2.15
ATP2A1O14983 AP002004.2-201ENST00000531656 154 ntBASIC1.64□□□□□ -2.15
ATP2A1O14983 MIR3145-201ENST00000580727 82 ntBASIC1.64□□□□□ -2.15
ATP2A1O14983 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.64□□□□□ -2.15
ATP2A1O14983 AL162424.1-201ENST00000602325 221 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms