Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 Y_RNA.142-201ENST00000363491 102 ntBASIC1.06□□□□□ -2.24
CUX2O14529 Y_RNA.339-201ENST00000365325 102 ntBASIC1.06□□□□□ -2.24
CUX2O14529 SNORA75.4-201ENST00000391278 119 ntBASIC1.06□□□□□ -2.24
CUX2O14529 MTND3P10-201ENST00000450967 341 ntBASIC1.06□□□□□ -2.24
CUX2O14529 MIR2053-201ENST00000459295 91 ntBASIC1.06□□□□□ -2.24
CUX2O14529 AC018710.1-201ENST00000506509 158 ntBASIC1.06□□□□□ -2.24
CUX2O14529 RNU6-922P-201ENST00000516753 99 ntBASIC1.06□□□□□ -2.24
CUX2O14529 MIR2355-201ENST00000517199 87 ntBASIC1.06□□□□□ -2.24
CUX2O14529 U6.115-201ENST00000636045 103 ntBASIC1.06□□□□□ -2.24
CUX2O14529 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
CUX2O14529 SNORA27.1-201ENST00000362604 124 ntBASIC1.05□□□□□ -2.24
CUX2O14529 MIR653-201ENST00000385279 96 ntBASIC1.05□□□□□ -2.24
CUX2O14529 RNA5SP482-201ENST00000391269 118 ntBASIC1.05□□□□□ -2.24
CUX2O14529 RNU6-625P-201ENST00000459412 107 ntBASIC1.05□□□□□ -2.24
CUX2O14529 AC091021.1-201ENST00000468051 388 ntBASIC1.05□□□□□ -2.24
CUX2O14529 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.05□□□□□ -2.24
CUX2O14529 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.05□□□□□ -2.24
CUX2O14529 MIR3674-201ENST00000636576 68 ntBASIC1.05□□□□□ -2.24
CUX2O14529 SNORA2.2-201ENST00000365473 135 ntBASIC1.05□□□□□ -2.24
CUX2O14529 Y_RNA.404-201ENST00000383978 102 ntBASIC1.05□□□□□ -2.24
CUX2O14529 U8.16-201ENST00000391279 133 ntBASIC1.05□□□□□ -2.24
CUX2O14529 AL451046.2-201ENST00000403074 277 ntBASIC1.05□□□□□ -2.24
CUX2O14529 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.05□□□□□ -2.24
CUX2O14529 U8.22-201ENST00000459141 133 ntBASIC1.05□□□□□ -2.24
CUX2O14529 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.05□□□□□ -2.24
CUX2O14529 AP002004.2-201ENST00000531656 154 ntBASIC1.05□□□□□ -2.24
CUX2O14529 AC090049.2-201ENST00000550377 109 ntBASIC1.05□□□□□ -2.24
CUX2O14529 AC091178.2-201ENST00000584401 117 ntBASIC1.05□□□□□ -2.24
CUX2O14529 AC125232.2-201ENST00000592457 143 ntBASIC1.05□□□□□ -2.24
CUX2O14529 AL357075.2-201ENST00000614906 189 ntBASIC1.05□□□□□ -2.24
CUX2O14529 MIR5087-201ENST00000635826 76 ntBASIC1.05□□□□□ -2.24
CUX2O14529 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.04□□□□□ -2.24
CUX2O14529 RNU6-99P-201ENST00000364721 107 ntBASIC1.04□□□□□ -2.24
CUX2O14529 RNA5SP299-201ENST00000391203 116 ntBASIC1.04□□□□□ -2.24
CUX2O14529 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CUX2O14529 RNU6-1054P-201ENST00000411293 104 ntBASIC1.04□□□□□ -2.24
CUX2O14529 AC093850.1-201ENST00000454121 251 ntBASIC1.04□□□□□ -2.24
CUX2O14529 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
CUX2O14529 AC069439.1-201ENST00000494739 167 ntBASIC1.04□□□□□ -2.24
CUX2O14529 SNORA31.4-201ENST00000516049 129 ntBASIC1.04□□□□□ -2.24
CUX2O14529 MIR4802-201ENST00000581881 80 ntBASIC1.04□□□□□ -2.24
CUX2O14529 AC018865.2-201ENST00000423631 129 ntBASIC1.03□□□□□ -2.24
CUX2O14529 CALM2P4-201ENST00000430810 426 ntBASIC1.03□□□□□ -2.24
CUX2O14529 RNU6-408P-201ENST00000515910 100 ntBASIC1.03□□□□□ -2.24
CUX2O14529 RNU6-165P-201ENST00000517170 99 ntBASIC1.03□□□□□ -2.24
CUX2O14529 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.03□□□□□ -2.24
CUX2O14529 MIR5690-201ENST00000583739 73 ntBASIC1.03□□□□□ -2.24
CUX2O14529 AC006380.1-201ENST00000603598 186 ntBASIC1.03□□□□□ -2.24
CUX2O14529 AL022345.2-201ENST00000606307 135 ntBASIC1.03□□□□□ -2.24
CUX2O14529 MIR1244-1-201ENST00000612829 85 ntBASIC1.03□□□□□ -2.24
CUX2O14529 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.03□□□□□ -2.24
CUX2O14529 MIR1244-3-201ENST00000635744 85 ntBASIC1.03□□□□□ -2.24
CUX2O14529 MIR1244-2-201ENST00000636449 85 ntBASIC1.03□□□□□ -2.24
CUX2O14529 MIR1244-4-202ENST00000636813 85 ntBASIC1.03□□□□□ -2.24
CUX2O14529 RNA5SP361-201ENST00000362686 118 ntBASIC1.02□□□□□ -2.25
CUX2O14529 Y_RNA.72-201ENST00000362894 103 ntBASIC1.02□□□□□ -2.25
CUX2O14529 Y_RNA.88-201ENST00000363029 99 ntBASIC1.02□□□□□ -2.25
CUX2O14529 Y_RNA.170-201ENST00000363746 110 ntBASIC1.02□□□□□ -2.25
CUX2O14529 RNU4-67P-201ENST00000364569 141 ntBASIC1.02□□□□□ -2.25
CUX2O14529 RNU6-767P-201ENST00000384132 107 ntBASIC1.02□□□□□ -2.25
CUX2O14529 RNU6-505P-201ENST00000384427 107 ntBASIC1.02□□□□□ -2.25
CUX2O14529 RNU6-1156P-201ENST00000410365 100 ntBASIC1.02□□□□□ -2.25
CUX2O14529 SNORD12B-201ENST00000410433 91 ntBASIC1.02□□□□□ -2.25
CUX2O14529 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.02□□□□□ -2.25
CUX2O14529 RAB28P5-201ENST00000427490 651 ntBASIC1.02□□□□□ -2.25
CUX2O14529 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.02□□□□□ -2.25
CUX2O14529 RPL39P39-201ENST00000455840 151 ntBASIC1.02□□□□□ -2.25
CUX2O14529 AC048334.1-201ENST00000477975 159 ntBASIC1.02□□□□□ -2.25
CUX2O14529 AC116353.2-201ENST00000505332 712 ntBASIC1.02□□□□□ -2.25
CUX2O14529 AC105758.1-201ENST00000506038 399 ntBASIC1.02□□□□□ -2.25
CUX2O14529 SNORD116-28-201ENST00000516123 91 ntBASIC1.02□□□□□ -2.25
CUX2O14529 SCARNA16.2-201ENST00000516520 172 ntBASIC1.02□□□□□ -2.25
CUX2O14529 RNU6-1291P-201ENST00000516591 104 ntBASIC1.02□□□□□ -2.25
CUX2O14529 MIR4723-201ENST00000585070 81 ntBASIC1.02□□□□□ -2.25
CUX2O14529 AC004467.1-201ENST00000615678 330 ntBASIC1.02□□□□□ -2.25
CUX2O14529 AC005592.1-201ENST00000566527 1640 ntBASIC1.02□□□□□ -2.25
CUX2O14529 MIR410-201ENST00000362222 80 ntBASIC1.01□□□□□ -2.25
CUX2O14529 RNU6-874P-201ENST00000362390 105 ntBASIC1.01□□□□□ -2.25
CUX2O14529 SNORA1B-201ENST00000362535 133 ntBASIC1.01□□□□□ -2.25
CUX2O14529 RNU6-454P-201ENST00000364292 107 ntBASIC1.01□□□□□ -2.25
CUX2O14529 RNU6-424P-201ENST00000384367 105 ntBASIC1.01□□□□□ -2.25
CUX2O14529 MIR520G-201ENST00000385064 90 ntBASIC1.01□□□□□ -2.25
CUX2O14529 RNU6-910P-201ENST00000390844 107 ntBASIC1.01□□□□□ -2.25
CUX2O14529 SNORA69.1-201ENST00000390904 137 ntBASIC1.01□□□□□ -2.25
CUX2O14529 Z98949.2-201ENST00000440996 144 ntBASIC1.01□□□□□ -2.25
CUX2O14529 AL137792.2-201ENST00000443484 235 ntBASIC1.01□□□□□ -2.25
CUX2O14529 OR9P1P-201ENST00000496431 281 ntBASIC1.01□□□□□ -2.25
CUX2O14529 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.01□□□□□ -2.25
CUX2O14529 SNORA40.9-201ENST00000515895 93 ntBASIC1.01□□□□□ -2.25
CUX2O14529 AC139792.2-201ENST00000624218 587 ntBASIC1.01□□□□□ -2.25
CUX2O14529 RNU6-845P-201ENST00000362578 103 ntBASIC1□□□□□ -2.25
CUX2O14529 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1□□□□□ -2.25
CUX2O14529 RNU6-318P-201ENST00000384283 103 ntBASIC1□□□□□ -2.25
CUX2O14529 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
CUX2O14529 RNU6-192P-201ENST00000391253 100 ntBASIC1□□□□□ -2.25
CUX2O14529 SUMO1P2-201ENST00000452524 304 ntBASIC1□□□□□ -2.25
CUX2O14529 LINC01399-202ENST00000458450 244 ntBASIC1□□□□□ -2.25
CUX2O14529 SNORA31.2-201ENST00000516019 134 ntBASIC1□□□□□ -2.25
CUX2O14529 AL357312.1-201ENST00000603879 298 ntBASIC1□□□□□ -2.25
CUX2O14529 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms