Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC104695.3-201ENST00000604052 296 ntBASIC1.35□□□□□ -2.19
E2F3O00716 AC127459.3-201ENST00000624328 466 ntBASIC1.35□□□□□ -2.19
E2F3O00716 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
E2F3O00716 Y_RNA.124-201ENST00000363339 93 ntBASIC1.34□□□□□ -2.19
E2F3O00716 SNORD115-30-201ENST00000364117 82 ntBASIC1.34□□□□□ -2.19
E2F3O00716 SNORA4.2-201ENST00000365313 147 ntBASIC1.34□□□□□ -2.19
E2F3O00716 RNU6-937P-201ENST00000384325 106 ntBASIC1.34□□□□□ -2.19
E2F3O00716 Y_RNA.551-201ENST00000384661 102 ntBASIC1.34□□□□□ -2.19
E2F3O00716 Y_RNA.645-201ENST00000391229 102 ntBASIC1.34□□□□□ -2.19
E2F3O00716 RPL21P1-201ENST00000399532 476 ntBASIC1.34□□□□□ -2.19
E2F3O00716 AL031003.1-201ENST00000404229 172 ntBASIC1.34□□□□□ -2.19
E2F3O00716 AL390729.2-201ENST00000416137 156 ntBASIC1.34□□□□□ -2.19
E2F3O00716 AC005534.2-201ENST00000431047 433 ntBASIC1.34□□□□□ -2.19
E2F3O00716 RPEP5-201ENST00000441137 268 ntBASIC1.34□□□□□ -2.19
E2F3O00716 RNU7-94P-201ENST00000459576 63 ntBASIC1.34□□□□□ -2.19
E2F3O00716 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.34□□□□□ -2.19
E2F3O00716 RNU6-1278P-201ENST00000516130 107 ntBASIC1.34□□□□□ -2.19
E2F3O00716 RNU6-397P-201ENST00000516226 104 ntBASIC1.34□□□□□ -2.19
E2F3O00716 RNA5SP102-201ENST00000516865 106 ntBASIC1.34□□□□□ -2.19
E2F3O00716 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.34□□□□□ -2.19
E2F3O00716 AC022616.4-201ENST00000522985 181 ntBASIC1.34□□□□□ -2.19
E2F3O00716 AC022441.3-201ENST00000605737 136 ntBASIC1.34□□□□□ -2.19
E2F3O00716 AC011373.1-201ENST00000607270 237 ntBASIC1.34□□□□□ -2.19
E2F3O00716 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.34□□□□□ -2.2
E2F3O00716 Y_RNA.331-201ENST00000365267 102 ntBASIC1.33□□□□□ -2.2
E2F3O00716 RNU6-53P-201ENST00000365367 106 ntBASIC1.33□□□□□ -2.2
E2F3O00716 Y_RNA.462-201ENST00000384268 102 ntBASIC1.33□□□□□ -2.2
E2F3O00716 RNU6-1065P-201ENST00000384513 106 ntBASIC1.33□□□□□ -2.2
E2F3O00716 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
E2F3O00716 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
E2F3O00716 RNU6-823P-201ENST00000391042 103 ntBASIC1.33□□□□□ -2.2
E2F3O00716 AC245047.3-201ENST00000429428 127 ntBASIC1.33□□□□□ -2.2
E2F3O00716 AL606517.2-201ENST00000442855 241 ntBASIC1.33□□□□□ -2.2
E2F3O00716 AC005042.3-201ENST00000453230 174 ntBASIC1.33□□□□□ -2.2
E2F3O00716 RNU7-34P-201ENST00000459394 64 ntBASIC1.33□□□□□ -2.2
E2F3O00716 RPS26P45-201ENST00000471748 340 ntBASIC1.33□□□□□ -2.2
E2F3O00716 RPL30P7-201ENST00000479312 323 ntBASIC1.33□□□□□ -2.2
E2F3O00716 Y_RNA.715-201ENST00000517082 110 ntBASIC1.33□□□□□ -2.2
E2F3O00716 RNU7-128P-201ENST00000517247 62 ntBASIC1.33□□□□□ -2.2
E2F3O00716 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.33□□□□□ -2.2
E2F3O00716 MIR4709-201ENST00000577272 72 ntBASIC1.33□□□□□ -2.2
E2F3O00716 SNORA4-201ENST00000584302 138 ntBASIC1.33□□□□□ -2.2
E2F3O00716 AC005828.6-201ENST00000606610 232 ntBASIC1.33□□□□□ -2.2
E2F3O00716 AL021879.1-201ENST00000611756 288 ntBASIC1.33□□□□□ -2.2
E2F3O00716 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.33□□□□□ -2.2
E2F3O00716 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
E2F3O00716 AC018630.2-201ENST00000534866 2403 ntBASIC1.32□□□□□ -2.2
E2F3O00716 Y_RNA.267-201ENST00000364679 109 ntBASIC1.32□□□□□ -2.2
E2F3O00716 SNORA63.7-201ENST00000365579 123 ntBASIC1.32□□□□□ -2.2
E2F3O00716 AC117470.1-201ENST00000381974 330 ntBASIC1.32□□□□□ -2.2
E2F3O00716 RNU6-505P-201ENST00000384427 107 ntBASIC1.32□□□□□ -2.2
E2F3O00716 RNU6-21P-201ENST00000384710 107 ntBASIC1.32□□□□□ -2.2
E2F3O00716 Y_RNA.570-201ENST00000384750 101 ntBASIC1.32□□□□□ -2.2
E2F3O00716 RNU6-1199P-201ENST00000411249 104 ntBASIC1.32□□□□□ -2.2
E2F3O00716 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.32□□□□□ -2.2
E2F3O00716 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.32□□□□□ -2.2
E2F3O00716 HMGN1P7-201ENST00000491722 313 ntBASIC1.32□□□□□ -2.2
E2F3O00716 RNU6-63P-201ENST00000516690 95 ntBASIC1.32□□□□□ -2.2
E2F3O00716 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
E2F3O00716 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
E2F3O00716 AC022217.4-201ENST00000604389 163 ntBASIC1.32□□□□□ -2.2
E2F3O00716 AL353770.2-201ENST00000620024 78 ntBASIC1.32□□□□□ -2.2
E2F3O00716 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.32□□□□□ -2.2
E2F3O00716 MIR6079-201ENST00000635807 62 ntBASIC1.32□□□□□ -2.2
E2F3O00716 SNORD114-7-201ENST00000362520 77 ntBASIC1.31□□□□□ -2.2
E2F3O00716 Y_RNA.158-201ENST00000363651 101 ntBASIC1.31□□□□□ -2.2
E2F3O00716 Y_RNA.191-201ENST00000363972 113 ntBASIC1.31□□□□□ -2.2
E2F3O00716 Y_RNA.329-201ENST00000365209 107 ntBASIC1.31□□□□□ -2.2
E2F3O00716 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.31□□□□□ -2.2
E2F3O00716 Y_RNA.527-201ENST00000384573 102 ntBASIC1.31□□□□□ -2.2
E2F3O00716 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
E2F3O00716 MIR194-1-201ENST00000384892 85 ntBASIC1.31□□□□□ -2.2
E2F3O00716 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
E2F3O00716 RNU6-440P-201ENST00000390882 105 ntBASIC1.31□□□□□ -2.2
E2F3O00716 RNU4-30P-201ENST00000410245 143 ntBASIC1.31□□□□□ -2.2
E2F3O00716 RN7SKP200-201ENST00000410564 320 ntBASIC1.31□□□□□ -2.2
E2F3O00716 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.31□□□□□ -2.2
E2F3O00716 AC233266.1-201ENST00000454518 96 ntBASIC1.31□□□□□ -2.2
E2F3O00716 RPS29P29-201ENST00000456396 171 ntBASIC1.31□□□□□ -2.2
E2F3O00716 RNU6-436P-201ENST00000516171 114 ntBASIC1.31□□□□□ -2.2
E2F3O00716 RNU6-966P-201ENST00000516479 104 ntBASIC1.31□□□□□ -2.2
E2F3O00716 RNU6-1046P-201ENST00000516538 107 ntBASIC1.31□□□□□ -2.2
E2F3O00716 AL929325.1-201ENST00000603096 117 ntBASIC1.31□□□□□ -2.2
E2F3O00716 PART1_1.1-201ENST00000611761 217 ntBASIC1.31□□□□□ -2.2
E2F3O00716 AC242852.1-201ENST00000612151 96 ntBASIC1.31□□□□□ -2.2
E2F3O00716 MIR8054-201ENST00000620877 86 ntBASIC1.31□□□□□ -2.2
E2F3O00716 AC244015.1-201ENST00000622301 99 ntBASIC1.31□□□□□ -2.2
E2F3O00716 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.31□□□□□ -2.2
E2F3O00716 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.3□□□□□ -2.2
E2F3O00716 RNU6-1227P-201ENST00000383981 107 ntBASIC1.3□□□□□ -2.2
E2F3O00716 SNORD63-201ENST00000384262 68 ntBASIC1.3□□□□□ -2.2
E2F3O00716 Y_RNA.466-201ENST00000384294 113 ntBASIC1.3□□□□□ -2.2
E2F3O00716 MIR1252-201ENST00000408861 65 ntBASIC1.3□□□□□ -2.2
E2F3O00716 RNU6-130P-201ENST00000411112 103 ntBASIC1.3□□□□□ -2.2
E2F3O00716 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.3□□□□□ -2.2
E2F3O00716 RPS27P1-201ENST00000450552 247 ntBASIC1.3□□□□□ -2.2
E2F3O00716 AC091021.1-201ENST00000468051 388 ntBASIC1.3□□□□□ -2.2
E2F3O00716 RNU6-1337P-201ENST00000516525 95 ntBASIC1.3□□□□□ -2.2
E2F3O00716 AC019288.1-201ENST00000557918 224 ntBASIC1.3□□□□□ -2.2
E2F3O00716 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms