Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC013244.3-201ENST00000605614 388 ntBASIC-1.14□□□□□ -2.59
HMGN4O00479 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.14□□□□□ -2.59
HMGN4O00479 AC010205.1-201ENST00000616668 449 ntBASIC-1.14□□□□□ -2.59
HMGN4O00479 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.14□□□□□ -2.59
HMGN4O00479 ZNF299P-201ENST00000406845 1804 ntBASIC-1.15□□□□□ -2.59
HMGN4O00479 SNORD50B-201ENST00000364995 70 ntBASIC-1.15□□□□□ -2.59
HMGN4O00479 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.15□□□□□ -2.59
HMGN4O00479 U8.17-201ENST00000391292 132 ntBASIC-1.15□□□□□ -2.59
HMGN4O00479 MTCYBP4-201ENST00000401524 249 ntBASIC-1.15□□□□□ -2.59
HMGN4O00479 AC112204.1-201ENST00000502591 103 ntBASIC-1.15□□□□□ -2.59
HMGN4O00479 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.15□□□□□ -2.59
HMGN4O00479 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.15□□□□□ -2.59
HMGN4O00479 RNU6-830P-201ENST00000516353 107 ntBASIC-1.15□□□□□ -2.59
HMGN4O00479 AP003181.2-201ENST00000528941 181 ntBASIC-1.15□□□□□ -2.59
HMGN4O00479 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.16□□□□□ -2.6
HMGN4O00479 SNORD38C-201ENST00000384381 69 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 MIR588-201ENST00000384900 83 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 SNORD83B-201ENST00000386745 93 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 MRPL42P2-201ENST00000403169 426 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 MIR1265-201ENST00000408444 86 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 RNU6-855P-201ENST00000410395 104 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 MTATP6P23-201ENST00000440153 476 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 RPL23AP75-201ENST00000491601 451 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 RNU6-475P-201ENST00000516073 104 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.16□□□□□ -2.6
HMGN4O00479 AC008507.2-201ENST00000588402 1176 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 AC023510.2-201ENST00000622162 746 ntBASIC-1.16□□□□□ -2.6
HMGN4O00479 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 SNORA22B-201ENST00000383876 138 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 MT-TF-201ENST00000387314 71 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.17□□□□□ -2.6
HMGN4O00479 SSR1P2-201ENST00000415208 787 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.17□□□□□ -2.6
HMGN4O00479 SPINT5P-201ENST00000448174 155 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 snoU13.16-201ENST00000459350 104 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 RNU2-13P-201ENST00000515909 113 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 SCARNA17-201ENST00000516183 144 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 AC105029.1-201ENST00000520250 669 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.17□□□□□ -2.6
HMGN4O00479 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.17□□□□□ -2.6
HMGN4O00479 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.17□□□□□ -2.6
HMGN4O00479 AC063944.3-201ENST00000609969 533 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 AC084368.1-201ENST00000620935 65 ntBASIC-1.17□□□□□ -2.6
HMGN4O00479 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.18□□□□□ -2.6
HMGN4O00479 RNU6-740P-201ENST00000364734 105 ntBASIC-1.18□□□□□ -2.6
HMGN4O00479 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.18□□□□□ -2.6
HMGN4O00479 RNA5SP25-201ENST00000410815 110 ntBASIC-1.18□□□□□ -2.6
HMGN4O00479 U8.21-201ENST00000459536 136 ntBASIC-1.18□□□□□ -2.6
HMGN4O00479 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.18□□□□□ -2.6
HMGN4O00479 AL121895.2-201ENST00000619558 447 ntBASIC-1.18□□□□□ -2.6
HMGN4O00479 AL162376.1-201ENST00000624117 175 ntBASIC-1.18□□□□□ -2.6
HMGN4O00479 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.19□□□□□ -2.6
HMGN4O00479 RNU4-83P-201ENST00000410863 133 ntBASIC-1.19□□□□□ -2.6
HMGN4O00479 RNU6-847P-201ENST00000411115 108 ntBASIC-1.19□□□□□ -2.6
HMGN4O00479 AL354751.2-201ENST00000415471 210 ntBASIC-1.19□□□□□ -2.6
HMGN4O00479 AL008987.1-201ENST00000415528 237 ntBASIC-1.19□□□□□ -2.6
HMGN4O00479 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.19□□□□□ -2.6
HMGN4O00479 MTCO2P27-201ENST00000420740 428 ntBASIC-1.19□□□□□ -2.6
HMGN4O00479 SCARNA18-201ENST00000459004 134 ntBASIC-1.19□□□□□ -2.6
HMGN4O00479 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.19□□□□□ -2.6
HMGN4O00479 AC069431.2-201ENST00000604149 1099 ntBASIC-1.19□□□□□ -2.6
HMGN4O00479 AL512427.1-201ENST00000618593 349 ntBASIC-1.19□□□□□ -2.6
HMGN4O00479 RNY1P12-201ENST00000364251 105 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 SNORA1.2-201ENST00000365189 134 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 RNU6-47P-201ENST00000383866 107 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 SNORD38B-201ENST00000384690 67 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 AC073464.1-201ENST00000429823 534 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 SNRPGP10-201ENST00000432323 225 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 snoU13.2-201ENST00000459201 104 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.2□□□□□ -2.6
HMGN4O00479 AC093303.1-201ENST00000514549 295 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 MTND4LP18-201ENST00000526864 291 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 AL157687.1-201ENST00000554853 619 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 MIR4775-201ENST00000581168 75 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 AL355297.3-201ENST00000604082 446 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 AL359999.1-201ENST00000604513 294 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 AP001330.5-201ENST00000607176 411 ntBASIC-1.2□□□□□ -2.6
HMGN4O00479 MIR30D-201ENST00000362283 70 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 SNORA1-201ENST00000384107 130 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 SNORD73A-201ENST00000386062 65 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 RNU6-131P-201ENST00000391144 107 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 AL512286.1-201ENST00000439244 400 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.21□□□□□ -2.6
HMGN4O00479 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.21□□□□□ -2.6
HMGN4O00479 RNU6-107P-201ENST00000516643 102 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.21□□□□□ -2.6
HMGN4O00479 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.21□□□□□ -2.6
HMGN4O00479 AP000811.1-201ENST00000603803 651 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.21□□□□□ -2.6
HMGN4O00479 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.22□□□□□ -2.6
HMGN4O00479 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.22□□□□□ -2.6
HMGN4O00479 U8.6-201ENST00000364939 135 ntBASIC-1.22□□□□□ -2.6
HMGN4O00479 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms