Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RNU6-1217P-201ENST00000411276 104 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 RNU6-785P-201ENST00000411324 104 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 RN7SL323P-201ENST00000494712 295 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 SNORD67.1-201ENST00000516618 108 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 MIR6868-201ENST00000611215 58 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 U6.90-201ENST00000614007 104 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 U6.70-201ENST00000620287 104 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 MIR8054-201ENST00000620877 86 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 AC009093.8-201ENST00000641769 292 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF223E7ERA6 ZNF962P-201ENST00000443465 3140 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF223E7ERA6 AC091152.2-201ENST00000591628 2569 ntBASIC3.4□□□□□ -1.87
RNF223E7ERA6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF223E7ERA6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF223E7ERA6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF223E7ERA6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF223E7ERA6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF223E7ERA6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF223E7ERA6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF223E7ERA6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RNF223E7ERA6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
RNF223E7ERA6 SNORA63.2-201ENST00000362603 126 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 RNU6-833P-201ENST00000363486 107 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 MIR483-201ENST00000385070 76 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 RNU6-1321P-201ENST00000390905 107 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 RNU2-59P-201ENST00000410482 191 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF223E7ERA6 CST9LP2-201ENST00000437612 320 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 AC245047.7-201ENST00000440265 293 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF223E7ERA6 SNORD4B-201ENST00000459083 72 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 RPL29P14-201ENST00000495837 428 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 RNU6-448P-201ENST00000517052 107 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 AC025627.2-201ENST00000576220 160 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 AC007179.3-201ENST00000604976 235 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF223E7ERA6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF223E7ERA6 AC008163.1-202ENST00000636004 2889 ntBASIC3.39□□□□□ -1.87
RNF223E7ERA6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF223E7ERA6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF223E7ERA6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF223E7ERA6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF223E7ERA6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF223E7ERA6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF223E7ERA6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF223E7ERA6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF223E7ERA6 RNA5SP133-201ENST00000363368 119 ntBASIC3.38□□□□□ -1.87
RNF223E7ERA6 RNU6-160P-201ENST00000384591 107 ntBASIC3.38□□□□□ -1.87
RNF223E7ERA6 MIR561-201ENST00000385216 97 ntBASIC3.38□□□□□ -1.87
RNF223E7ERA6 U3.44-201ENST00000458938 192 ntBASIC3.38□□□□□ -1.87
RNF223E7ERA6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF223E7ERA6 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
RNF223E7ERA6 MIR5684-201ENST00000585074 65 ntBASIC3.38□□□□□ -1.87
RNF223E7ERA6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF223E7ERA6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF223E7ERA6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF223E7ERA6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RNF223E7ERA6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF223E7ERA6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.37□□□□□ -1.87
RNF223E7ERA6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF223E7ERA6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF223E7ERA6 AC087190.4-201ENST00000574616 8334 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF223E7ERA6 Y_RNA.98-201ENST00000363109 102 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 SNORD114-10-201ENST00000363409 72 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 SNORD35B-201ENST00000363660 87 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 RNU6-634P-201ENST00000459134 106 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 Y_RNA.660-201ENST00000516002 120 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 RNA5SP360-201ENST00000516555 118 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 AC026403.1-201ENST00000518938 295 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 IGLV3-26-201ENST00000520756 302 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 AC243994.1-201ENST00000618627 109 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 MIR7154-201ENST00000620673 73 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 AC110079.1-202ENST00000635213 138 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 MIR7515-201ENST00000637837 67 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF223E7ERA6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF223E7ERA6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.37□□□□□ -1.87
RNF223E7ERA6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF223E7ERA6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF223E7ERA6 RNU6-1086P-201ENST00000410930 100 ntBASIC3.36□□□□□ -1.87
RNF223E7ERA6 RNU6-602P-201ENST00000411155 105 ntBASIC3.36□□□□□ -1.87
RNF223E7ERA6 AC006539.3-201ENST00000454258 129 ntBASIC3.36□□□□□ -1.87
RNF223E7ERA6 RNU7-48P-201ENST00000458875 63 ntBASIC3.36□□□□□ -1.87
RNF223E7ERA6 SEM1P1-201ENST00000506694 209 ntBASIC3.36□□□□□ -1.87
RNF223E7ERA6 RNU1-95P-201ENST00000516357 160 ntBASIC3.36□□□□□ -1.87
RNF223E7ERA6 RNU1-128P-201ENST00000516704 160 ntBASIC3.36□□□□□ -1.87
RNF223E7ERA6 AC100770.1-201ENST00000532310 322 ntBASIC3.36□□□□□ -1.87
RNF223E7ERA6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.36□□□□□ -1.87
RNF223E7ERA6 AL355297.2-201ENST00000604792 129 ntBASIC3.36□□□□□ -1.87
RNF223E7ERA6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RNF223E7ERA6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RNF223E7ERA6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF223E7ERA6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF223E7ERA6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF223E7ERA6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF223E7ERA6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms