Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-2.34□□□□□ -2.78
LINC01549A6NIU2 RNU6-855P-201ENST00000410395 104 ntBASIC-2.34□□□□□ -2.78
LINC01549A6NIU2 RNA5SP475-201ENST00000410568 110 ntBASIC-2.34□□□□□ -2.78
LINC01549A6NIU2 HLA-S-202ENST00000425174 53 ntBASIC-2.34□□□□□ -2.78
LINC01549A6NIU2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.34□□□□□ -2.78
LINC01549A6NIU2 AL596211.1-201ENST00000569873 2277 ntBASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 RNU6-25P-201ENST00000383873 107 ntBASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 RNU6-708P-201ENST00000384217 107 ntBASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 RNU6-29P-201ENST00000384637 107 ntBASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 RNU6-607P-201ENST00000411283 108 ntBASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 MTND4P24-201ENST00000424002 397 ntBASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 snoU13.2-201ENST00000459201 104 ntBASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 AC010598.1-201ENST00000510378 103 ntBASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 POLR3GP1-201ENST00000594073 261 ntBASIC-2.35□□□□□ -2.79
LINC01549A6NIU2 RNU6-511P-201ENST00000363496 107 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 Y_RNA.150-201ENST00000363562 102 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 U8.15-201ENST00000390947 134 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 RNU2-42P-201ENST00000410697 113 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 EEF1A1P40-201ENST00000412883 573 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 ELOCP17-201ENST00000414751 326 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 USP9YP12-201ENST00000450481 570 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 SNORD11B-201ENST00000607707 90 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 MIR1264-201ENST00000616374 69 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 AC013437.2-201ENST00000639587 677 ntBASIC-2.36□□□□□ -2.79
LINC01549A6NIU2 Y_RNA.6-201ENST00000362350 114 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 Y_RNA.52-201ENST00000362760 96 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 RNU6-621P-201ENST00000364752 109 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 RNU6-673P-201ENST00000365084 104 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 SNORD38B-201ENST00000384690 67 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 AC010587.1-201ENST00000505809 469 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 MTND3P25-201ENST00000509243 135 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 AC026421.1-201ENST00000519101 163 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 ADI1P3-201ENST00000549509 470 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 AC099785.1-201ENST00000605697 437 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 Z97988.1-201ENST00000637697 135 ntBASIC-2.37□□□□□ -2.79
LINC01549A6NIU2 MIR409-201ENST00000362237 79 ntBASIC-2.38□□□□□ -2.79
LINC01549A6NIU2 Y_RNA.324-201ENST00000365165 102 ntBASIC-2.38□□□□□ -2.79
LINC01549A6NIU2 SNORD41.1-201ENST00000391000 69 ntBASIC-2.38□□□□□ -2.79
LINC01549A6NIU2 RNU6-1250P-201ENST00000391218 107 ntBASIC-2.38□□□□□ -2.79
LINC01549A6NIU2 MIR320B2-201ENST00000408479 138 ntBASIC-2.38□□□□□ -2.79
LINC01549A6NIU2 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-2.38□□□□□ -2.79
LINC01549A6NIU2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-2.38□□□□□ -2.79
LINC01549A6NIU2 RNU4-28P-201ENST00000364739 141 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 RNU6-609P-201ENST00000365459 107 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 Y_RNA.365-201ENST00000365537 102 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 Y_RNA.458-201ENST00000384240 102 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 Y_RNA.539-201ENST00000384635 107 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 NDUFAF4P4-201ENST00000454883 502 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 AC105417.1-201ENST00000514691 285 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 RNA5SP461-201ENST00000516451 104 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 RNU6-175P-201ENST00000516896 107 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 AC068880.4-201ENST00000623082 495 ntBASIC-2.39□□□□□ -2.79
LINC01549A6NIU2 SNORD51.1-201ENST00000365405 77 ntBASIC-2.4□□□□□ -2.79
LINC01549A6NIU2 AL359672.1-201ENST00000442302 409 ntBASIC-2.4□□□□□ -2.79
LINC01549A6NIU2 Y_RNA.697-201ENST00000516776 113 ntBASIC-2.4□□□□□ -2.79
LINC01549A6NIU2 AC005776.1-201ENST00000603164 290 ntBASIC-2.4□□□□□ -2.79
LINC01549A6NIU2 AC023158.2-201ENST00000614876 543 ntBASIC-2.4□□□□□ -2.79
LINC01549A6NIU2 AL354950.2-201ENST00000617939 290 ntBASIC-2.4□□□□□ -2.79
LINC01549A6NIU2 RNU6-1084P-201ENST00000362498 107 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 Y_RNA.49-201ENST00000362714 112 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 Y_RNA.57-201ENST00000362806 113 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 SNORD114-29-201ENST00000364819 70 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 snoU2-30.1-201ENST00000365012 70 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 MIR181B2-201ENST00000385004 89 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 EIF1AXP2-201ENST00000555940 413 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 BNIP3P40-201ENST00000596017 556 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 AL133255.1-201ENST00000606374 441 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 AC012409.4-201ENST00000612923 249 ntBASIC-2.41□□□□□ -2.8
LINC01549A6NIU2 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 SNORD74.6-201ENST00000364796 70 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 Y_RNA.326-201ENST00000365176 113 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 RNU6-847P-201ENST00000411115 108 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 MTND1P32-201ENST00000433043 938 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 UQCRBP2-201ENST00000447827 297 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 RNU2-13P-201ENST00000515909 113 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 AC131281.1-201ENST00000522984 164 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 MTND5P34-201ENST00000568888 325 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 AC073539.2-201ENST00000597113 165 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 AL360085.1-201ENST00000604713 532 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 AL158050.2-201ENST00000605336 568 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 AC011373.1-201ENST00000607270 237 ntBASIC-2.42□□□□□ -2.8
LINC01549A6NIU2 RNU6-403P-201ENST00000363163 104 ntBASIC-2.43□□□□□ -2.8
LINC01549A6NIU2 RNU6-509P-201ENST00000363519 107 ntBASIC-2.43□□□□□ -2.8
LINC01549A6NIU2 RNU2-39P-201ENST00000410604 198 ntBASIC-2.43□□□□□ -2.8
LINC01549A6NIU2 RNU2-62P-201ENST00000410868 191 ntBASIC-2.43□□□□□ -2.8
LINC01549A6NIU2 RNA5SP484-201ENST00000458857 111 ntBASIC-2.43□□□□□ -2.8
LINC01549A6NIU2 DEFB131E-201ENST00000532329 154 ntBASIC-2.43□□□□□ -2.8
LINC01549A6NIU2 AC091965.4-201ENST00000607691 587 ntBASIC-2.43□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms