Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 Y_RNA.114-201ENST00000363265 113 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 SNORA8-201ENST00000384574 139 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 CST2P1-201ENST00000425770 87 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.5□□□□□ -1.85
USP17L4A6NCW7 SNORD109B-201ENST00000458961 67 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 SNORD109A-201ENST00000459128 67 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 AP002004.2-201ENST00000531656 154 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 AC133485.4-201ENST00000561835 220 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 AC138907.4-201ENST00000570107 226 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 AC008507.4-201ENST00000585464 127 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 U6.108-201ENST00000637764 58 ntBASIC3.5□□□□□ -1.85
USP17L4A6NCW7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.5□□□□□ -1.85
USP17L4A6NCW7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP17L4A6NCW7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
USP17L4A6NCW7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP17L4A6NCW7 RNU6-647P-201ENST00000364243 107 ntBASIC3.49□□□□□ -1.85
USP17L4A6NCW7 SNORD114-6-201ENST00000364393 72 ntBASIC3.49□□□□□ -1.85
USP17L4A6NCW7 RNU6-1144P-201ENST00000384247 104 ntBASIC3.49□□□□□ -1.85
USP17L4A6NCW7 RNU6-1072P-201ENST00000384703 107 ntBASIC3.49□□□□□ -1.85
USP17L4A6NCW7 RNU6-443P-201ENST00000384780 107 ntBASIC3.49□□□□□ -1.85
USP17L4A6NCW7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.49□□□□□ -1.85
USP17L4A6NCW7 AL445687.1-201ENST00000439946 251 ntBASIC3.49□□□□□ -1.85
USP17L4A6NCW7 MTATP6P21-201ENST00000440681 189 ntBASIC3.49□□□□□ -1.85
USP17L4A6NCW7 RPS26P45-201ENST00000471748 340 ntBASIC3.49□□□□□ -1.85
USP17L4A6NCW7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.49□□□□□ -1.85
USP17L4A6NCW7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP17L4A6NCW7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP17L4A6NCW7 AC093010.3-201ENST00000570269 15214 ntBASIC3.48□□□□□ -1.85
USP17L4A6NCW7 MIR126-201ENST00000362291 85 ntBASIC3.48□□□□□ -1.85
USP17L4A6NCW7 SNORD24-201ENST00000383884 75 ntBASIC3.48□□□□□ -1.85
USP17L4A6NCW7 AL117342.1-201ENST00000404861 406 ntBASIC3.48□□□□□ -1.85
USP17L4A6NCW7 RNA5SP274-201ENST00000410484 108 ntBASIC3.48□□□□□ -1.85
USP17L4A6NCW7 AC006483.1-201ENST00000487308 313 ntBASIC3.48□□□□□ -1.85
USP17L4A6NCW7 RNU6-1061P-201ENST00000516530 99 ntBASIC3.48□□□□□ -1.85
USP17L4A6NCW7 RNU2-60P-201ENST00000517290 128 ntBASIC3.48□□□□□ -1.85
USP17L4A6NCW7 MIR4435-1-201ENST00000582552 80 ntBASIC3.48□□□□□ -1.85
USP17L4A6NCW7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP17L4A6NCW7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP17L4A6NCW7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
USP17L4A6NCW7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.48□□□□□ -1.85
USP17L4A6NCW7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.47□□□□□ -1.85
USP17L4A6NCW7 MIR196B-201ENST00000384852 84 ntBASIC3.47□□□□□ -1.85
USP17L4A6NCW7 MIR802-201ENST00000390235 94 ntBASIC3.47□□□□□ -1.85
USP17L4A6NCW7 MIR891A-201ENST00000401237 79 ntBASIC3.47□□□□□ -1.85
USP17L4A6NCW7 MIR1262-201ENST00000408276 93 ntBASIC3.47□□□□□ -1.85
USP17L4A6NCW7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.47□□□□□ -1.85
USP17L4A6NCW7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.47□□□□□ -1.85
USP17L4A6NCW7 RNU5E-3P-201ENST00000515913 68 ntBASIC3.47□□□□□ -1.85
USP17L4A6NCW7 MTND5P34-201ENST00000568888 325 ntBASIC3.47□□□□□ -1.85
USP17L4A6NCW7 MIR3129-201ENST00000581095 76 ntBASIC3.47□□□□□ -1.85
USP17L4A6NCW7 AL591926.4-201ENST00000616895 298 ntBASIC3.47□□□□□ -1.85
USP17L4A6NCW7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
USP17L4A6NCW7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
USP17L4A6NCW7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.47□□□□□ -1.85
USP17L4A6NCW7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP17L4A6NCW7 RNA5SP383-201ENST00000362934 120 ntBASIC3.46□□□□□ -1.86
USP17L4A6NCW7 SNORA33-201ENST00000363664 130 ntBASIC3.46□□□□□ -1.86
USP17L4A6NCW7 MIR627-201ENST00000384979 97 ntBASIC3.46□□□□□ -1.86
USP17L4A6NCW7 SNORD72-201ENST00000390994 80 ntBASIC3.46□□□□□ -1.86
USP17L4A6NCW7 AL049830.1-201ENST00000468034 425 ntBASIC3.46□□□□□ -1.86
USP17L4A6NCW7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP17L4A6NCW7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP17L4A6NCW7 SNORA1B-201ENST00000362535 133 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 RNU6-888P-201ENST00000363010 101 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 RNU6-153P-201ENST00000364422 104 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP17L4A6NCW7 RNU6-1292P-201ENST00000383856 107 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 RN7SL330P-201ENST00000469709 307 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 AC096725.1-201ENST00000514266 313 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 RNU6-1270P-201ENST00000517128 108 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 AC026271.5-201ENST00000577873 130 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.45□□□□□ -1.86
USP17L4A6NCW7 AC022217.4-201ENST00000604389 163 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 MIR6129-201ENST00000616087 109 ntBASIC3.45□□□□□ -1.86
USP17L4A6NCW7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP17L4A6NCW7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
USP17L4A6NCW7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
USP17L4A6NCW7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
USP17L4A6NCW7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
USP17L4A6NCW7 SNORD61-201ENST00000384252 73 ntBASIC3.44□□□□□ -1.86
USP17L4A6NCW7 RNU6-429P-201ENST00000384582 108 ntBASIC3.44□□□□□ -1.86
USP17L4A6NCW7 MIR9-1-201ENST00000385198 89 ntBASIC3.44□□□□□ -1.86
USP17L4A6NCW7 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.44□□□□□ -1.86
USP17L4A6NCW7 AF228730.3-201ENST00000436691 102 ntBASIC3.44□□□□□ -1.86
USP17L4A6NCW7 MIR3186-201ENST00000577404 85 ntBASIC3.44□□□□□ -1.86
USP17L4A6NCW7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP17L4A6NCW7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.44□□□□□ -1.86
USP17L4A6NCW7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP17L4A6NCW7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP17L4A6NCW7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
USP17L4A6NCW7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.43□□□□□ -1.86
USP17L4A6NCW7 RNU1-112P-201ENST00000364401 164 ntBASIC3.43□□□□□ -1.86
USP17L4A6NCW7 SNORA1-201ENST00000384107 130 ntBASIC3.43□□□□□ -1.86
USP17L4A6NCW7 SNORA46-201ENST00000384762 135 ntBASIC3.43□□□□□ -1.86
USP17L4A6NCW7 SNORA40.5-201ENST00000391061 128 ntBASIC3.43□□□□□ -1.86
USP17L4A6NCW7 AL138827.1-201ENST00000402666 306 ntBASIC3.43□□□□□ -1.86
USP17L4A6NCW7 SNRPGP13-201ENST00000442212 177 ntBASIC3.43□□□□□ -1.86
USP17L4A6NCW7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.43□□□□□ -1.86
USP17L4A6NCW7 AL163195.1-201ENST00000496941 348 ntBASIC3.43□□□□□ -1.86
USP17L4A6NCW7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms