Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MIR521-1-201ENST00000384902 87 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 RNU2-29P-201ENST00000410423 189 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 RPL21P38-201ENST00000418090 167 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 RPS29P8-201ENST00000445109 171 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 SNORA31.14-201ENST00000516728 116 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 CR383656.4-201ENST00000546909 122 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 AL158211.2-201ENST00000607282 395 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 AL162726.3-218ENST00000636401 95 ntBASIC-0.78□□□□□ -2.53
TCRBV3S1A0A5B6 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 MIR153-2-201ENST00000385225 87 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-903P-201ENST00000391270 109 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 AL590002.1-201ENST00000406554 418 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 AC073464.1-201ENST00000429823 534 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 AC114755.3-201ENST00000481111 251 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 PIGPP4-201ENST00000584447 307 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 AP001180.6-201ENST00000584918 159 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 MIR4999-201ENST00000585029 91 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 AP000811.1-201ENST00000603803 651 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 Z84480.1-201ENST00000605131 311 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 Pinc.1-201ENST00000616452 154 ntBASIC-0.79□□□□□ -2.54
TCRBV3S1A0A5B6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 RNA5SP457-201ENST00000363657 124 ntBASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 SNORD114-11-201ENST00000363738 75 ntBASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 SNORD75.1-201ENST00000408373 60 ntBASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-855P-201ENST00000410395 104 ntBASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 RNA5SP285-201ENST00000516619 119 ntBASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 RNU7-181P-201ENST00000517234 74 ntBASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 AC006566.1-201ENST00000608943 513 ntBASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 AC022306.2-201ENST00000617563 647 ntBASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.8□□□□□ -2.54
TCRBV3S1A0A5B6 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 SNORD115-24-201ENST00000363528 82 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-674P-201ENST00000363831 107 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-740P-201ENST00000364734 105 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-480P-201ENST00000384332 107 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 MIR588-201ENST00000384900 83 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-195P-201ENST00000411352 109 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 RPL30P16-201ENST00000419341 429 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 SNRPGP14-201ENST00000435400 219 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 AC109327.2-201ENST00000448339 378 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 CCDC34P1-201ENST00000507441 517 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 AL590491.3-201ENST00000610731 82 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 AL158063.1-201ENST00000615349 536 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 AL391099.1-201ENST00000624635 187 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 AC006927.3-201ENST00000638789 384 ntBASIC-0.81□□□□□ -2.54
TCRBV3S1A0A5B6 MIR148A-201ENST00000362215 68 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-811P-201ENST00000384069 107 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 SNORD38C-201ENST00000384381 69 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 MIR215-201ENST00000384858 110 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 AL008987.1-201ENST00000415528 237 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-135P-201ENST00000516769 101 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 AL157687.1-201ENST00000554853 619 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 AC006600.1-201ENST00000572529 153 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 MIR4677-201ENST00000584153 80 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 MIR4263-201ENST00000584745 83 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 MIR4639-201ENST00000584938 69 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 SNORA70.25-201ENST00000612741 95 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 RN7SL660P-201ENST00000614852 299 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 AC134878.1-201ENST00000619901 243 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 AC244669.1-204ENST00000621564 178 ntBASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.82□□□□□ -2.54
TCRBV3S1A0A5B6 MIR30D-201ENST00000362283 70 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 SNORD114-7-201ENST00000362520 77 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 RNA5SP98-201ENST00000363158 137 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-636P-201ENST00000384598 107 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 MIR518F-201ENST00000384973 87 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 MIR563-201ENST00000385080 79 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-131P-201ENST00000391144 107 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 SNORA75.4-201ENST00000391278 119 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 MTCO3P40-201ENST00000392516 676 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 RNA5SP451-201ENST00000410588 110 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-847P-201ENST00000411115 108 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 RNU7-180P-201ENST00000459240 63 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 RPL30P10-201ENST00000488148 337 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 MIR4432-201ENST00000581823 84 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 TUSC7.1-201ENST00000610969 165 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 HULC.1-201ENST00000612720 240 ntBASIC-0.83□□□□□ -2.54
TCRBV3S1A0A5B6 MIR101-1-201ENST00000362265 75 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-454P-201ENST00000364292 107 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms