Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR215-201ENST00000384858 110 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORA75.1-201ENST00000391130 148 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 U8.17-201ENST00000391292 132 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 MTCO3P40-201ENST00000392516 676 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 FCF1P9-201ENST00000412546 282 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 AL354751.2-201ENST00000415471 210 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 AC244250.2-201ENST00000418731 148 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 MTCO1P20-201ENST00000425366 358 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 SNRPGP10-201ENST00000432323 225 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 U8.21-201ENST00000459536 136 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORA31.14-201ENST00000516728 116 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 AC138749.4-201ENST00000563970 127 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR4703-201ENST00000577728 79 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 AC022306.2-201ENST00000617563 647 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 SEPT14P19-203ENST00000633205 211 ntBASIC-0.84□□□□□ -2.54
TRAV1-2A0A0B4J238 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-931P-201ENST00000363850 107 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 RNA5SP205-201ENST00000364653 136 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU7-138P-201ENST00000459479 64 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 AC093303.1-201ENST00000514549 295 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 AC105417.1-201ENST00000514691 285 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 SCOCP1-201ENST00000554676 349 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 AC064836.2-201ENST00000609491 462 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 AC009878.1-201ENST00000621819 340 ntBASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.85□□□□□ -2.55
TRAV1-2A0A0B4J238 MT-TQ-201ENST00000387372 72 ntBASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 SNORA75.4-201ENST00000391278 119 ntBASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 AC107297.1-201ENST00000459991 176 ntBASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 GMFBP1-201ENST00000467831 427 ntBASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR6507-201ENST00000613630 70 ntBASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-489P-201ENST00000618289 107 ntBASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 AC244669.1-204ENST00000621564 178 ntBASIC-0.86□□□□□ -2.55
TRAV1-2A0A0B4J238 SNORD114-14-201ENST00000362723 75 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 SNORD115-32-201ENST00000364079 82 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-740P-201ENST00000364734 105 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR563-201ENST00000385080 79 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR873-201ENST00000401120 77 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-855P-201ENST00000410395 104 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 AC104850.1-201ENST00000435940 476 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 SNORA25.10-201ENST00000515926 124 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 SNORA19.3-201ENST00000516165 130 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-410P-201ENST00000517006 107 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 LRRC34P1-201ENST00000542742 915 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 U7.6-201ENST00000610841 64 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 SNORA70.25-201ENST00000612741 95 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 AC099654.13-201ENST00000639774 207 ntBASIC-0.87□□□□□ -2.55
TRAV1-2A0A0B4J238 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR101-2-201ENST00000362195 79 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-660P-201ENST00000364566 109 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR588-201ENST00000384900 83 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR518F-201ENST00000384973 87 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-159P-201ENST00000391080 106 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR876-201ENST00000401147 81 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR548L-201ENST00000408303 86 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU7-73P-201ENST00000458743 63 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 CPDP1-201ENST00000579660 283 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR378D2-201ENST00000580636 98 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 AC005828.6-201ENST00000606610 232 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 AL136370.1-201ENST00000608166 691 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 AC023510.2-201ENST00000622162 746 ntBASIC-0.88□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-280P-201ENST00000364145 104 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 SNORD38C-201ENST00000384381 69 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR1265-201ENST00000408444 86 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 AL512286.1-201ENST00000439244 400 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 AL138752.1-201ENST00000452964 351 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 AC010424.1-201ENST00000506336 297 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-138P-201ENST00000515952 107 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-107P-201ENST00000516643 102 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 AC009248.2-201ENST00000619826 254 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms