Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SNORA70.25-201ENST00000612741 95 ntBASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR101-2-201ENST00000362195 79 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 SNORA75.4-201ENST00000391278 119 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 U8.17-201ENST00000391292 132 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 AL022718.1-201ENST00000412004 84 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 AL354751.2-201ENST00000415471 210 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 SCARNA18-201ENST00000459004 134 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-830P-201ENST00000516353 107 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 AC090572.1-201ENST00000519251 160 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR4436A-201ENST00000585278 85 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR6507-201ENST00000613630 70 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.09□□□□□ -2.58
TRAV13-2A0A0B4J235 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-784P-201ENST00000384330 106 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 SNORA3B-201ENST00000391305 131 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 MTCO3P40-201ENST00000392516 676 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-855P-201ENST00000410395 104 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 MTCO2P27-201ENST00000420740 428 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU7-167P-201ENST00000459160 62 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU7-138P-201ENST00000459479 64 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-107P-201ENST00000516643 102 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 MIR3681-201ENST00000580089 72 ntBASIC-1.1□□□□□ -2.59
TRAV13-2A0A0B4J235 SNORD38C-201ENST00000384381 69 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 MIR876-201ENST00000401147 81 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-757P-201ENST00000410334 100 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 SNRPGP10-201ENST00000432323 225 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 AL512286.1-201ENST00000439244 400 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 MTATP6P26-201ENST00000445926 662 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 AL138752.1-201ENST00000452964 351 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 AC016550.1-201ENST00000505348 785 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 AC010424.1-201ENST00000506336 297 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 AC093303.1-201ENST00000514549 295 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 AC105417.1-201ENST00000514691 285 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU2-13P-201ENST00000515909 113 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 uc_338.11-201ENST00000619132 160 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 AL158209.2-201ENST00000619266 216 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 SEPT14P19-203ENST00000633205 211 ntBASIC-1.11□□□□□ -2.59
TRAV13-2A0A0B4J235 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 RNY1P7-201ENST00000384743 110 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 MIR588-201ENST00000384900 83 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 AL008987.1-201ENST00000415528 237 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 AC073464.1-201ENST00000429823 534 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU7-73P-201ENST00000458743 63 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 AP001328.1-201ENST00000528550 176 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 SCOCP1-201ENST00000554676 349 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 MTATP6P25-201ENST00000574491 261 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 AC005771.1-201ENST00000585581 349 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 AC087685.1-201ENST00000587507 141 ntBASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.12□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 RNA5SP368-201ENST00000364298 116 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-847P-201ENST00000411115 108 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 SNORD27.1-201ENST00000516319 72 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-410P-201ENST00000517006 107 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 AC105029.1-201ENST00000520250 669 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 MIR4703-201ENST00000577728 79 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 AC245008.1-201ENST00000608123 476 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 AC023510.2-201ENST00000622162 746 ntBASIC-1.13□□□□□ -2.59
TRAV13-2A0A0B4J235 ZNF299P-201ENST00000406845 1804 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-280P-201ENST00000364145 104 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-740P-201ENST00000364734 105 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-131P-201ENST00000391144 107 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 MTCO1P20-201ENST00000425366 358 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU7-181P-201ENST00000517234 74 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 AC069431.2-201ENST00000604149 1099 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 AL136370.1-201ENST00000608166 691 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 AC064836.2-201ENST00000609491 462 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 AL512506.1-201ENST00000613918 449 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 AC010205.1-201ENST00000616668 449 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-489P-201ENST00000618289 107 ntBASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.14□□□□□ -2.59
TRAV13-2A0A0B4J235 AL589826.1-201ENST00000340697 249 ntBASIC-1.15□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.15□□□□□ -2.59
TRAV13-2A0A0B4J235 SNORD115-32-201ENST00000364079 82 ntBASIC-1.15□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU6-74P-201ENST00000384235 107 ntBASIC-1.15□□□□□ -2.59
TRAV13-2A0A0B4J235 SNORD38B-201ENST00000384690 67 ntBASIC-1.15□□□□□ -2.59
TRAV13-2A0A0B4J235 MT-TF-201ENST00000387314 71 ntBASIC-1.15□□□□□ -2.59
TRAV13-2A0A0B4J235 RNU4-83P-201ENST00000410863 133 ntBASIC-1.15□□□□□ -2.59
TRAV13-2A0A0B4J235 MTATP6P20-201ENST00000414147 562 ntBASIC-1.15□□□□□ -2.59
TRAV13-2A0A0B4J235 SSR1P2-201ENST00000415208 787 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms