Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 SNORD68-201ENST00000363214 84 ntBASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 Y_RNA.796-201ENST00000364268 102 ntBASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 Y_RNA.799-201ENST00000364992 102 ntBASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 RNA5SP282-201ENST00000516355 108 ntBASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 SCARNA16.3-201ENST00000516595 184 ntBASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR3668-201ENST00000582138 75 ntBASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR6840-201ENST00000611937 71 ntBASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GTF3C3Q9Y5Q9 Y_RNA.111-201ENST00000363248 100 ntBASIC3.4□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-103P-201ENST00000363686 107 ntBASIC3.4□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-414P-201ENST00000363705 104 ntBASIC3.4□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU4-10P-201ENST00000364383 140 ntBASIC3.4□□□□□ -1.87
GTF3C3Q9Y5Q9 RNY3P5-201ENST00000384127 102 ntBASIC3.4□□□□□ -1.87
GTF3C3Q9Y5Q9 MIR134-201ENST00000385258 73 ntBASIC3.4□□□□□ -1.87
GTF3C3Q9Y5Q9 MLLT10P1-201ENST00000418346 262 ntBASIC3.4□□□□□ -1.87
GTF3C3Q9Y5Q9 AL627230.6-201ENST00000611129 280 ntBASIC3.4□□□□□ -1.87
GTF3C3Q9Y5Q9 AP000553.5-201ENST00000641933 54 ntBASIC3.4□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-1020P-201ENST00000363684 107 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 MIR144-201ENST00000384886 86 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 Z98949.2-201ENST00000440996 144 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 Y_RNA.644-201ENST00000459006 113 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 AC079804.2-201ENST00000490376 200 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 AC008885.1-201ENST00000514930 301 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-138P-201ENST00000515952 107 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 Y_RNA.674-201ENST00000516362 113 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 AC034105.4-201ENST00000568304 277 ntBASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
GTF3C3Q9Y5Q9 Y_RNA.7-201ENST00000362352 102 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-661P-201ENST00000362409 107 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 Y_RNA.785-201ENST00000384290 109 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 MIR616-201ENST00000385293 97 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 Y_RNA.793-201ENST00000411222 111 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 RN7SKP101-201ENST00000411376 320 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 OR9P1P-201ENST00000496431 281 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 AC026403.1-201ENST00000518938 295 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 AC022254.1-201ENST00000567857 235 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 MIR4762-201ENST00000585261 75 ntBASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
GTF3C3Q9Y5Q9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-1084P-201ENST00000362498 107 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 Y_RNA.29-201ENST00000362570 113 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 Y_RNA.121-201ENST00000363309 113 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 RNA5SP50-201ENST00000363731 107 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 U8.5-201ENST00000364528 136 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 RPS29P4-201ENST00000414733 161 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 MRPS17P9-201ENST00000511924 393 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 RNY3P16-201ENST00000516338 101 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-126P-201ENST00000516685 103 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 MIR5694-201ENST00000581190 76 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 AL391903.3-201ENST00000612158 163 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 AC084757.4-201ENST00000616350 526 ntBASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GTF3C3Q9Y5Q9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 SNORA71.1-201ENST00000364523 117 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 SNORA62.3-201ENST00000365110 153 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 MIR522-201ENST00000385071 87 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-1228P-201ENST00000391014 107 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-493P-201ENST00000391321 108 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 PTMAP2-201ENST00000397627 327 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 PGBD4P5-201ENST00000445958 426 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 RPS27P21-201ENST00000486977 252 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-182P-201ENST00000516970 105 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 SNORA44.1-201ENST00000517031 108 ntBASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GTF3C3Q9Y5Q9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
GTF3C3Q9Y5Q9 Y_RNA.229-201ENST00000364347 113 ntBASIC3.35□□□□□ -1.87
GTF3C3Q9Y5Q9 Y_RNA.274-201ENST00000364714 101 ntBASIC3.35□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-923P-201ENST00000364753 107 ntBASIC3.35□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU6-381P-201ENST00000391259 108 ntBASIC3.35□□□□□ -1.87
GTF3C3Q9Y5Q9 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.35□□□□□ -1.87
GTF3C3Q9Y5Q9 AL513423.1-201ENST00000621695 132 ntBASIC3.35□□□□□ -1.87
GTF3C3Q9Y5Q9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GTF3C3Q9Y5Q9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GTF3C3Q9Y5Q9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 AC068700.1-201ENST00000565862 3754 ntBASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU4-70P-201ENST00000384579 139 ntBASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 MIR200C-201ENST00000384980 68 ntBASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 MIR1278-201ENST00000408753 81 ntBASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 RNU4-47P-201ENST00000410876 114 ntBASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 SNORA81.3-201ENST00000517283 198 ntBASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 uc_338.4-201ENST00000616635 176 ntBASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 AC027279.3-201ENST00000625055 122 ntBASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 AC080100.1-201ENST00000624239 5356 ntBASIC3.34□□□□□ -1.87
GTF3C3Q9Y5Q9 snoU2-30.1-201ENST00000365012 70 ntBASIC3.33□□□□□ -1.88
GTF3C3Q9Y5Q9 SNORA9-201ENST00000384215 133 ntBASIC3.33□□□□□ -1.88
GTF3C3Q9Y5Q9 AC092017.2-201ENST00000427600 362 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 580 ms