Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AP000811.1-201ENST00000603803 651 ntBASIC-1.39□□□□□ -2.63
AP4S1Q9Y587 AL359999.1-201ENST00000604513 294 ntBASIC-1.39□□□□□ -2.63
AP4S1Q9Y587 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.4□□□□□ -2.63
AP4S1Q9Y587 SNORD114-25-201ENST00000363742 72 ntBASIC-1.4□□□□□ -2.63
AP4S1Q9Y587 SNORA20B-201ENST00000384220 132 ntBASIC-1.4□□□□□ -2.63
AP4S1Q9Y587 RNU6-39P-201ENST00000384344 107 ntBASIC-1.4□□□□□ -2.63
AP4S1Q9Y587 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.4□□□□□ -2.63
AP4S1Q9Y587 AL500527.2-201ENST00000454105 95 ntBASIC-1.4□□□□□ -2.63
AP4S1Q9Y587 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.4□□□□□ -2.63
AP4S1Q9Y587 AC137590.2-201ENST00000619709 240 ntBASIC-1.4□□□□□ -2.63
AP4S1Q9Y587 SNORD56.2-201ENST00000363242 71 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 MIR588-201ENST00000384900 83 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 MIR204-201ENST00000385200 110 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 SSR1P2-201ENST00000415208 787 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 MTCO2P27-201ENST00000420740 428 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 AC018865.2-201ENST00000423631 129 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 MTND1P14-201ENST00000427400 950 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 MTND4P18-201ENST00000447010 465 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 RNU6-329P-201ENST00000459618 107 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 RNA5SP20-201ENST00000515976 84 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 IGKV1-22-201ENST00000524313 326 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 AC245297.2-201ENST00000610119 565 ntBASIC-1.41□□□□□ -2.64
AP4S1Q9Y587 ZNF299P-201ENST00000406845 1804 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 RNU6-117P-201ENST00000365415 107 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 MIR522-201ENST00000385071 87 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 MIR516B1-201ENST00000385211 90 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 RNU6-855P-201ENST00000410395 104 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 RNU4-83P-201ENST00000410863 133 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 MTND4P33-201ENST00000556706 766 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 RMST_3.1-201ENST00000611651 109 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 AC023510.2-201ENST00000622162 746 ntBASIC-1.42□□□□□ -2.64
AP4S1Q9Y587 MIR30D-201ENST00000362283 70 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 RNU6-136P-201ENST00000384663 107 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 RNU6-291P-201ENST00000384720 107 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 MIR320B2-201ENST00000408479 138 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 RNA5SP25-201ENST00000410815 110 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 RPL7P42-201ENST00000481005 679 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 AF186996.7-201ENST00000492781 209 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 MIR3118-1-201ENST00000581787 76 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 AC019226.2-201ENST00000625973 424 ntBASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.43□□□□□ -2.64
AP4S1Q9Y587 SNORD50B-201ENST00000364995 70 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 RNU6-468P-201ENST00000384003 109 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 RNU6-455P-201ENST00000384681 107 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 MIR1265-201ENST00000408444 86 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 MTND4P3-201ENST00000417829 541 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 BX276092.1-201ENST00000427368 251 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 AL137792.2-201ENST00000443484 235 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 MTND1P12-201ENST00000455231 147 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 AC018710.1-201ENST00000506509 158 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 RPL39P5-202ENST00000512505 151 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 AC097460.3-201ENST00000623099 442 ntBASIC-1.44□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 RNU6-407P-201ENST00000365280 104 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 MIR450B-201ENST00000401182 78 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 AL445193.1-201ENST00000441183 141 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 MTCO2P6-201ENST00000463134 685 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 RNU2-13P-201ENST00000515909 113 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 MIR4499-201ENST00000584834 69 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 AC016911.1-201ENST00000613297 452 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 uc_338.19-201ENST00000616808 99 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 AC126544.2-201ENST00000625174 749 ntBASIC-1.45□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.46□□□□□ -2.64
AP4S1Q9Y587 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.46□□□□□ -2.64
AP4S1Q9Y587 RNU6-116P-201ENST00000384042 109 ntBASIC-1.46□□□□□ -2.64
AP4S1Q9Y587 U8.17-201ENST00000391292 132 ntBASIC-1.46□□□□□ -2.64
AP4S1Q9Y587 snoU13.2-201ENST00000459201 104 ntBASIC-1.46□□□□□ -2.64
AP4S1Q9Y587 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.46□□□□□ -2.64
AP4S1Q9Y587 RNA5SP337-201ENST00000517007 109 ntBASIC-1.46□□□□□ -2.64
AP4S1Q9Y587 AL133255.1-201ENST00000606374 441 ntBASIC-1.46□□□□□ -2.64
AP4S1Q9Y587 SNORA27.1-201ENST00000362604 124 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 RNU6-727P-201ENST00000363592 107 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 RNU6-715P-201ENST00000365204 103 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 RNU6-224P-201ENST00000384055 107 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms