Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 MIR126-201ENST00000362291 85 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 RNU4-79P-201ENST00000362764 141 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 RNU6-454P-201ENST00000364292 107 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 SNORD26-201ENST00000384147 75 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 MIR32-201ENST00000384965 70 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 MIR548B-201ENST00000385247 97 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 SNORA75.6-201ENST00000391318 127 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 MRPL42P3-201ENST00000401492 326 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 ELOCP21-201ENST00000412558 336 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.87□□□□□ -2.27
SHANK1Q9Y566 JTBP1-201ENST00000441314 247 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AL137792.2-201ENST00000443484 235 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.631-201ENST00000459607 101 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 HMGN1P13-201ENST00000505795 138 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 RNU6-507P-201ENST00000516045 100 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC025647.1-201ENST00000517879 253 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC040926.1-201ENST00000530195 238 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC006380.1-201ENST00000603598 186 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC006157.1-201ENST00000611750 366 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AL078604.3-201ENST00000615580 211 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC090971.5-201ENST00000621102 293 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 MIR6086-201ENST00000638065 55 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.87□□□□□ -2.27
SHANK1Q9Y566 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.70-201ENST00000362886 110 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.258-201ENST00000364613 105 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RNU6-1040P-201ENST00000383974 107 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 SNORA48.1-201ENST00000390879 135 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RN7SKP200-201ENST00000410564 320 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 AC008134.1-201ENST00000420943 193 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RPS27P16-201ENST00000425758 201 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RPL23AP6-201ENST00000446637 472 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.86□□□□□ -2.27
SHANK1Q9Y566 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RNU6-1132P-201ENST00000459214 107 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.86□□□□□ -2.27
SHANK1Q9Y566 SNORA25.10-201ENST00000515926 124 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RNU6-1170P-201ENST00000515974 106 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RNU6-1041P-201ENST00000516254 102 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RNVU1-2-201ENST00000516326 135 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 AC100821.1-201ENST00000523153 2479 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.243-201ENST00000364481 109 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.384-201ENST00000383909 102 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RNU6-306P-201ENST00000384617 107 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RNU6-1001P-201ENST00000411265 100 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 MTCO3P10-201ENST00000455912 772 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RPS26P45-201ENST00000471748 340 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 SNORA40.14-201ENST00000516543 86 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 RNU6-1291P-201ENST00000516591 104 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 DEFB108E-201ENST00000524692 240 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 AL365434.2-201ENST00000607979 234 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 AC134503.1-201ENST00000633048 54 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 MIR3674-201ENST00000636576 68 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 AC005592.1-201ENST00000566527 1640 ntBASIC0.86□□□□□ -2.27
SHANK1Q9Y566 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SHANK1Q9Y566 MIR330-201ENST00000362196 94 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.106-201ENST00000363189 100 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 RNU6-1304P-201ENST00000411374 106 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 AC004941.2-201ENST00000427009 228 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 PGBD4P5-201ENST00000445958 426 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 UQCRBP2-201ENST00000447827 297 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 FCF1P4-201ENST00000448326 183 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.639-201ENST00000458981 102 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 AL049830.1-201ENST00000468034 425 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 AC079140.2-201ENST00000506193 142 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 RNU1-117P-201ENST00000517041 158 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 AP002004.2-201ENST00000531656 154 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 U2.1-201ENST00000618978 145 ntBASIC0.85□□□□□ -2.27
SHANK1Q9Y566 RNU6-222P-201ENST00000362438 107 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.48-201ENST00000362710 103 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 SNORD63-201ENST00000384262 68 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 MIR676-201ENST00000390702 67 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 RNA5SP475-201ENST00000410568 110 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 RNU4-14P-201ENST00000410858 122 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.84□□□□□ -2.27
SHANK1Q9Y566 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.84□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.661-201ENST00000516003 99 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 RNU7-99P-201ENST00000516271 62 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 CYCSP23-201ENST00000519781 313 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.84□□□□□ -2.27
SHANK1Q9Y566 MIR4422-201ENST00000581938 83 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 AL109933.3-201ENST00000619095 188 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 AC104985.2-201ENST00000620598 500 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 U6.92-201ENST00000636464 89 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 MTND4P29-201ENST00000503122 1372 ntBASIC0.84□□□□□ -2.27
SHANK1Q9Y566 RNA5SP361-201ENST00000362686 118 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 RNU6-324P-201ENST00000363957 106 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 RNU6-407P-201ENST00000365280 104 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 RNU6-1310P-201ENST00000384153 107 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 MIR936-201ENST00000401264 98 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 MCFD2P1-201ENST00000417812 300 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 AL591704.2-201ENST00000421658 181 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 AC099677.2-201ENST00000436385 175 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 RPL26P26-201ENST00000480251 434 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 RNA5SP481-201ENST00000516814 122 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms