Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC005972.2-201ENST00000604690 348 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 MIR8054-201ENST00000620877 86 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 AP000553.5-201ENST00000641933 54 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-661P-201ENST00000362409 107 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 SNORD116-13-201ENST00000384408 92 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-482P-201ENST00000391068 107 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 MIR1302-6-201ENST00000408466 90 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 AC245047.3-201ENST00000429428 127 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 MTCO1P5-201ENST00000433573 344 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 TRBVB-201ENST00000477100 408 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 AC108210.2-201ENST00000503681 201 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-570P-201ENST00000517051 105 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 AL161670.1-201ENST00000554348 137 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 AC037487.3-201ENST00000606668 112 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 AC004832.4-201ENST00000608952 331 ntBASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.75□□□□□ -2.13
LSM4Q9Y4Z0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 RNU4-13P-201ENST00000364019 141 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 SNORA4.2-201ENST00000365313 147 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-440P-201ENST00000390882 105 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 SNORA48.3-201ENST00000391081 134 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 FTH1P12-201ENST00000432137 551 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 HSPE1P21-201ENST00000438283 308 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 snoU13.27-201ENST00000459278 104 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-1338P-201ENST00000516328 91 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 SNORA31.10-201ENST00000516482 106 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-1096P-201ENST00000517089 102 ntBASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.74□□□□□ -2.13
LSM4Q9Y4Z0 AC092881.1-201ENST00000638218 2733 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.16-201ENST00000362421 102 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-1323P-201ENST00000384025 107 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 RN7SKP200-201ENST00000410564 320 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 COX6CP10-201ENST00000416832 224 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 MTCYBP9-201ENST00000431021 303 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-717P-201ENST00000459076 104 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 RPL23AP42-201ENST00000471152 471 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 AC079804.2-201ENST00000490376 200 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 SCARNA16.3-201ENST00000516595 184 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 AP002004.2-201ENST00000531656 154 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 AL512605.2-201ENST00000592972 256 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 AL162424.1-201ENST00000602325 221 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 AC103810.8-201ENST00000607347 118 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 MIR6873-201ENST00000622788 63 ntBASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.73□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-801P-201ENST00000364087 105 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.267-201ENST00000364679 109 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.518-201ENST00000384552 113 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.556-201ENST00000384677 113 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 MIR568-201ENST00000385036 95 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 MT-TW-201ENST00000387382 68 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 AL135790.2-201ENST00000437701 267 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 MTND3P2-201ENST00000438452 342 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 AL603825.1-201ENST00000438481 80 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 RPS4XP11-201ENST00000446897 772 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 AC025033.1-201ENST00000463883 194 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 SERF1AP1-201ENST00000514575 187 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 RNA5SP200-201ENST00000516360 103 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 SNORA27.4-201ENST00000516650 95 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 RNU7-28P-201ENST00000516759 62 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 RNU7-116P-201ENST00000516940 62 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 MIR4709-201ENST00000577272 72 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 AP001282.2-201ENST00000616149 309 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 AC100821.1-201ENST00000523153 2479 ntBASIC1.72□□□□□ -2.13
LSM4Q9Y4Z0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 MIR335-201ENST00000362173 94 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 SNORA25.1-201ENST00000362326 128 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 RNU6-514P-201ENST00000384208 107 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.461-201ENST00000384263 103 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 SNORA72-201ENST00000384339 132 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 MIR1302-3-201ENST00000408128 138 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 RNA5SP338-201ENST00000410495 85 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 AL021397.1-201ENST00000451806 248 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 AC233266.1-201ENST00000454518 96 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 RNU6-1291P-201ENST00000516591 104 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 DEFB108E-201ENST00000524692 240 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 AC242852.1-201ENST00000612151 96 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 AC244015.1-201ENST00000622301 99 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 AC068647.2-201ENST00000637380 353 ntBASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LSM4Q9Y4Z0 AL391987.6-201ENST00000305671 199 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 RNU6-414P-201ENST00000363705 104 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.237-201ENST00000364439 102 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms