Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 DEFB108E-201ENST00000524692 240 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 MIR4255-201ENST00000579351 72 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 MIR4713-201ENST00000582691 75 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 AC062037.2-201ENST00000610137 73 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 AL353149.1-201ENST00000610667 244 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 SNORA27.1-201ENST00000362604 124 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.361-201ENST00000365515 120 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 RNU4-52P-201ENST00000384209 138 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.518-201ENST00000384552 113 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 SNORA48.1-201ENST00000390879 135 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 AL355796.1-201ENST00000406706 323 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.618-201ENST00000410949 107 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 HMGN2P34-201ENST00000437647 269 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 RNU6-717P-201ENST00000459076 104 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 SERF1AP1-201ENST00000514575 187 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 SNORA25.15-201ENST00000516487 89 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 MIR3169-201ENST00000578032 83 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 AP001282.2-201ENST00000616149 309 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 AC084768.2-201ENST00000622736 221 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 AC245060.5-201ENST00000610778 3293 ntBASIC2.91□□□□□ -1.94
CDK11AQ9UQ88 snoU2-30.2-201ENST00000362805 70 ntBASIC2.9□□□□□ -1.95
CDK11AQ9UQ88 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
CDK11AQ9UQ88 SNORD127-201ENST00000458892 86 ntBASIC2.9□□□□□ -1.95
CDK11AQ9UQ88 RNU6-1041P-201ENST00000516254 102 ntBASIC2.9□□□□□ -1.95
CDK11AQ9UQ88 AC022254.1-201ENST00000567857 235 ntBASIC2.9□□□□□ -1.95
CDK11AQ9UQ88 AC005786.1-201ENST00000588553 154 ntBASIC2.9□□□□□ -1.95
CDK11AQ9UQ88 snoU13.31-201ENST00000607291 104 ntBASIC2.9□□□□□ -1.95
CDK11AQ9UQ88 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDK11AQ9UQ88 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 Y_RNA.16-201ENST00000362421 102 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 Y_RNA.237-201ENST00000364439 102 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 RNA5SP138-201ENST00000365098 114 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 RNU6-407P-201ENST00000365280 104 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 MIR515-2-201ENST00000384883 83 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 MIR515-1-201ENST00000384884 83 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 RNU2-61P-201ENST00000411069 191 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 AC009310.1-201ENST00000414414 451 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 MRPS10P1-201ENST00000448483 130 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 RPL23AP7-203ENST00000449021 469 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 RNU6-1132P-201ENST00000459214 107 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 RPS27P22-201ENST00000478056 241 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 RNA5SP20-201ENST00000515976 84 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 RNU6-250P-201ENST00000516958 103 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 AC027419.1-201ENST00000522976 328 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 AC023157.2-201ENST00000540596 141 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 AL512605.2-201ENST00000592972 256 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 DEFB117-201ENST00000602356 141 ntBASIC2.89□□□□□ -1.95
CDK11AQ9UQ88 RNU11-5P-201ENST00000391216 129 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 AL627390.1-201ENST00000396055 340 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 RNA5SP338-201ENST00000410495 85 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 RNA5SP489-201ENST00000410986 109 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 AL021397.1-201ENST00000451806 248 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 SNORD13-201ENST00000459299 104 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 RPL39P38-201ENST00000467018 153 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 Y_RNA.673-201ENST00000516306 88 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 RNU1-40P-201ENST00000516816 164 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 RNU1-97P-201ENST00000516872 164 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 SCARNA24.2-201ENST00000516968 130 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 MIR338-201ENST00000636369 67 ntBASIC2.88□□□□□ -1.95
CDK11AQ9UQ88 Y_RNA.164-201ENST00000363709 102 ntBASIC2.87□□□□□ -1.95
CDK11AQ9UQ88 RNU6-505P-201ENST00000384427 107 ntBASIC2.87□□□□□ -1.95
CDK11AQ9UQ88 RNU6-417P-201ENST00000384712 107 ntBASIC2.87□□□□□ -1.95
CDK11AQ9UQ88 MIR548H3-201ENST00000408771 118 ntBASIC2.87□□□□□ -1.95
CDK11AQ9UQ88 HSPE1P13-201ENST00000451143 297 ntBASIC2.87□□□□□ -1.95
CDK11AQ9UQ88 MIR378A-201ENST00000362177 66 ntBASIC2.86□□□□□ -1.95
CDK11AQ9UQ88 Y_RNA.14-201ENST00000362415 103 ntBASIC2.86□□□□□ -1.95
CDK11AQ9UQ88 RNU6-457P-201ENST00000363999 107 ntBASIC2.86□□□□□ -1.95
CDK11AQ9UQ88 RNU2-38P-201ENST00000410856 79 ntBASIC2.86□□□□□ -1.95
CDK11AQ9UQ88 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.86□□□□□ -1.95
CDK11AQ9UQ88 MTCO1P5-201ENST00000433573 344 ntBASIC2.86□□□□□ -1.95
CDK11AQ9UQ88 RPS26P55-201ENST00000471178 356 ntBASIC2.86□□□□□ -1.95
CDK11AQ9UQ88 MIR4438-201ENST00000585271 93 ntBASIC2.86□□□□□ -1.95
CDK11AQ9UQ88 AC002984.1-201ENST00000591692 448 ntBASIC2.86□□□□□ -1.95
CDK11AQ9UQ88 RNU4-80P-201ENST00000363200 141 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 Y_RNA.287-201ENST00000364853 94 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 RNA5SP160-201ENST00000364866 120 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 Y_RNA.350-201ENST00000365409 98 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 Y_RNA.418-201ENST00000384029 102 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 SNORA67.5-201ENST00000391036 107 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 CST2P1-201ENST00000425770 87 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 RPS29P11-201ENST00000496507 171 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 MIR3145-201ENST00000580727 82 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 U6.73-201ENST00000619194 103 ntBASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK11AQ9UQ88 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CDK11AQ9UQ88 Y_RNA.352-201ENST00000365439 102 ntBASIC2.84□□□□□ -1.95
CDK11AQ9UQ88 RNU6-1278P-201ENST00000516130 107 ntBASIC2.84□□□□□ -1.95
CDK11AQ9UQ88 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.84□□□□□ -1.95
CDK11AQ9UQ88 AL359075.3-201ENST00000613288 217 ntBASIC2.84□□□□□ -1.95
CDK11AQ9UQ88 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CDK11AQ9UQ88 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.124-201ENST00000363339 93 ntBASIC2.83□□□□□ -1.96
CDK11AQ9UQ88 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms