Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 AC093831.2-201ENST00000624393 3427 ntBASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 FO393413.1-201ENST00000402892 195 ntBASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 AL021397.1-201ENST00000451806 248 ntBASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 RNU6-991P-201ENST00000516168 107 ntBASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 RN7SKP43-201ENST00000516173 320 ntBASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 RNU6-504P-201ENST00000516568 104 ntBASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 MIR7515-201ENST00000637837 67 ntBASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.11□□□□□ -1.91
AP4E1Q9UPM8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 SNORA71.1-201ENST00000364523 117 ntBASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 Y_RNA.253-201ENST00000364562 112 ntBASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 MIR548A2-201ENST00000384956 97 ntBASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 MIR1253-201ENST00000408273 105 ntBASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 HMGN1P7-201ENST00000491722 313 ntBASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 SNORA4.4-201ENST00000515921 135 ntBASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 SNORA48.11-201ENST00000517015 89 ntBASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.1□□□□□ -1.91
AP4E1Q9UPM8 AL035425.3-201ENST00000564206 4996 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 MIR450A1-201ENST00000362262 91 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 snoU2-30.2-201ENST00000362805 70 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 RNU6-888P-201ENST00000363010 101 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 Y_RNA.116-201ENST00000363292 103 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 RNU6-1292P-201ENST00000383856 107 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 SNORD24-201ENST00000383884 75 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 RNU6-32P-201ENST00000383948 107 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 RNU6-13P-201ENST00000384248 107 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 SNORD61-201ENST00000384252 73 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 Y_RNA.495-201ENST00000384435 112 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 RNU6-12P-201ENST00000384604 107 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 RNU6-41P-201ENST00000384741 107 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 SNORD72-201ENST00000390994 80 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 AC244505.4-201ENST00000434905 287 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 AL161788.1-201ENST00000441805 169 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 SSXP5-201ENST00000443473 287 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 SNORA72.7-201ENST00000516349 94 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 AC008507.4-201ENST00000585464 127 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 MIR5739-201ENST00000619803 80 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 MIR8057-201ENST00000620957 69 ntBASIC3.09□□□□□ -1.91
AP4E1Q9UPM8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
AP4E1Q9UPM8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.09□□□□□ -1.92
AP4E1Q9UPM8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 MIR483-201ENST00000385070 76 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 AL031121.1-201ENST00000406553 254 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 CALM2P4-201ENST00000430810 426 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 SNRPGP10-201ENST00000432323 225 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 AL031737.1-201ENST00000450125 223 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 RNA5SP385-201ENST00000515947 110 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 Y_RNA.694-201ENST00000516677 117 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 RNU6-1270P-201ENST00000517128 108 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 MIR5195-201ENST00000583555 115 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 AC007229.1-201ENST00000590455 412 ntBASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.08□□□□□ -1.92
AP4E1Q9UPM8 AC073346.2-201ENST00000624724 2058 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 MIR422A-201ENST00000362286 90 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 SNORA68.1-201ENST00000364537 132 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 Y_RNA.281-201ENST00000364774 94 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 SNORA12.1-201ENST00000390873 148 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 RNU6-1186P-201ENST00000410429 97 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 Y_RNA.621-201ENST00000411065 96 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 SEM1P1-201ENST00000506694 209 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 AC011406.1-201ENST00000512440 370 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 AC096725.1-201ENST00000514266 313 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 RNU7-99P-201ENST00000516271 62 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 RNU6-1291P-201ENST00000516591 104 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 RN7SKP57-201ENST00000517248 293 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 AC006254.2-201ENST00000603259 279 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 AL356280.1-201ENST00000603614 379 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
AP4E1Q9UPM8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 RNU6-106P-201ENST00000384405 107 ntBASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 SCARNA15-202ENST00000516881 127 ntBASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 U6.108-201ENST00000637764 58 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms