Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.83□□□□□ -2.28
CDH9Q9ULB4 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
CDH9Q9ULB4 AC011604.1-201ENST00000545978 196 ntBASIC0.83□□□□□ -2.28
CDH9Q9ULB4 SNORA4-201ENST00000584302 138 ntBASIC0.83□□□□□ -2.28
CDH9Q9ULB4 AL078603.1-201ENST00000603824 313 ntBASIC0.83□□□□□ -2.28
CDH9Q9ULB4 AC005828.6-201ENST00000606610 232 ntBASIC0.83□□□□□ -2.28
CDH9Q9ULB4 AL669831.3-213ENST00000636676 183 ntBASIC0.83□□□□□ -2.28
CDH9Q9ULB4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
CDH9Q9ULB4 AC073544.1-201ENST00000600110 1595 ntBASIC0.83□□□□□ -2.28
CDH9Q9ULB4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CDH9Q9ULB4 RNU6-1188P-201ENST00000363795 107 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 Y_RNA.358-201ENST00000365491 99 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 RNY1P14-201ENST00000384426 108 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 Y_RNA.646-201ENST00000410980 101 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 AC138393.2-201ENST00000414742 246 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 MTCYBP10-201ENST00000424905 650 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
CDH9Q9ULB4 RPS26P48-201ENST00000491713 339 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.82□□□□□ -2.28
CDH9Q9ULB4 RNU6-1278P-201ENST00000516130 107 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 RNA5SP220-201ENST00000516298 104 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 SNORA20.3-201ENST00000516880 132 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.82□□□□□ -2.28
CDH9Q9ULB4 AC055872.1-201ENST00000570978 278 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 U6atac.1-201ENST00000616025 117 ntBASIC0.82□□□□□ -2.28
CDH9Q9ULB4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 MIRLET7C-201ENST00000362160 84 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 RNU6-1301P-201ENST00000362724 104 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 RNU6-117P-201ENST00000365415 107 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 RNU6-310P-201ENST00000384655 107 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 RPL17P19-201ENST00000489069 552 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 RNU6-277P-201ENST00000516272 106 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 RNU6-1291P-201ENST00000516591 104 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.81□□□□□ -2.28
CDH9Q9ULB4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 AL117336.2-201ENST00000602435 335 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 MIR1244-1-201ENST00000612829 85 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.81□□□□□ -2.28
CDH9Q9ULB4 AC092794.2-201ENST00000620933 563 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 AC138305.3-201ENST00000624988 240 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 MIR1244-3-201ENST00000635744 85 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 U6.115-201ENST00000636045 103 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 MIR1244-2-201ENST00000636449 85 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 MIR1244-4-202ENST00000636813 85 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 TPTEP1-208ENST00000636884 213 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
CDH9Q9ULB4 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 RNU6-99P-201ENST00000364721 107 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.8□□□□□ -2.28
CDH9Q9ULB4 RNU6-969P-201ENST00000383900 105 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CDH9Q9ULB4 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 RNU6-1304P-201ENST00000411374 106 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 AC104332.1-201ENST00000440471 797 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 AL137792.2-201ENST00000443484 235 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 MTCO3P10-201ENST00000455912 772 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 LINC01399-202ENST00000458450 244 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 AC074133.1-201ENST00000515696 183 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 AC018448.1-201ENST00000552843 316 ntBASIC0.8□□□□□ -2.28
CDH9Q9ULB4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CDH9Q9ULB4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH9Q9ULB4 RNU6-961P-201ENST00000363893 105 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 Y_RNA.243-201ENST00000364481 109 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 Y_RNA.303-201ENST00000364998 94 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 RNU6-700P-201ENST00000391043 107 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 RNU6-876P-201ENST00000391295 104 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 SNORA75.6-201ENST00000391318 127 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 RNU5A-5P-201ENST00000411054 116 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.79□□□□□ -2.28
CDH9Q9ULB4 PCNPP5-201ENST00000452246 481 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.79□□□□□ -2.28
CDH9Q9ULB4 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 SNORA40.9-201ENST00000515895 93 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 RNU6-966P-201ENST00000516479 104 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 AC090142.3-201ENST00000519012 385 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.79□□□□□ -2.28
CDH9Q9ULB4 AC004832.4-201ENST00000608952 331 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 AC122108.2-201ENST00000611946 526 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 AL355073.2-201ENST00000612106 557 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 AC104260.1-201ENST00000616660 539 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 AC099654.14-201ENST00000638599 341 ntBASIC0.79□□□□□ -2.28
CDH9Q9ULB4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
CDH9Q9ULB4 Y_RNA.122-201ENST00000363331 96 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 RNU6-890P-201ENST00000384121 107 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 RNU6-42P-201ENST00000384165 107 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 SNORD116-29-201ENST00000384516 83 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 MIR520G-201ENST00000385064 90 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 MIR559-201ENST00000385188 96 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 MIR942-201ENST00000401111 86 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 RNU6-370P-201ENST00000411008 104 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 MRPS18CP6-201ENST00000423587 223 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 AC092423.1-201ENST00000430165 186 ntBASIC0.78□□□□□ -2.28
CDH9Q9ULB4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms