Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RNU1-58P-201ENST00000362413 163 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 RNU6-740P-201ENST00000364734 105 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.539-201ENST00000384635 107 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 HMGN2P39-201ENST00000398005 273 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 AL117342.1-201ENST00000404861 406 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 MIR1253-201ENST00000408273 105 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 RNU6-855P-201ENST00000410395 104 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.89□□□□□ -2.11
SIX4Q9UIU6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 HMGN2P23-201ENST00000456759 269 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 RNA5SP20-201ENST00000515976 84 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 SNORA70.12-201ENST00000516084 153 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 RNU6-1023P-201ENST00000516137 106 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 AP005660.1-201ENST00000522972 293 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 MIR4643-201ENST00000577473 78 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.89□□□□□ -2.11
SIX4Q9UIU6 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
SIX4Q9UIU6 AC245060.5-201ENST00000610778 3293 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 RNU6-379P-201ENST00000363813 104 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 RNU6-271P-201ENST00000363858 105 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 SNORD116-13-201ENST00000384408 92 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 SNORA40.19-201ENST00000390846 128 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 AL512604.1-201ENST00000404812 257 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 RNU6-651P-201ENST00000411040 105 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX4Q9UIU6 snoU13.23-201ENST00000458863 104 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 RNU6-1337P-201ENST00000516525 95 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 SNORA27.4-201ENST00000516650 95 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 RNU6-63P-201ENST00000516690 95 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 SUMO2P18-201ENST00000518873 252 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 MIR4287-201ENST00000579398 78 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 MIR3671-201ENST00000580455 88 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 MIR4438-201ENST00000585271 93 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 AC104984.5-201ENST00000586878 94 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 AL512605.2-201ENST00000592972 256 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 AC006435.5-201ENST00000624486 112 ntBASIC1.88□□□□□ -2.11
SIX4Q9UIU6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.20-201ENST00000362479 113 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.489-201ENST00000384410 101 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 AC099677.2-201ENST00000436385 175 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 RNU6-388P-201ENST00000517012 105 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 RNU6-389P-201ENST00000517048 105 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 RNU6-111P-201ENST00000517179 105 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX4Q9UIU6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.87□□□□□ -2.11
SIX4Q9UIU6 AL353149.1-201ENST00000610667 244 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 AC078938.1-201ENST00000620993 318 ntBASIC1.87□□□□□ -2.11
SIX4Q9UIU6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
SIX4Q9UIU6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SIX4Q9UIU6 UBE2WP1-201ENST00000362030 340 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 SNORD114-7-201ENST00000362520 77 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU6-862P-201ENST00000362804 105 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU1-22P-201ENST00000363334 158 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU6-1048P-201ENST00000364054 107 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU6-801P-201ENST00000364087 105 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.217-201ENST00000364214 105 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 SNORA20.1-201ENST00000364790 130 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.310-201ENST00000365063 113 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU6-117P-201ENST00000365415 107 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.476-201ENST00000384347 108 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU6-1289P-201ENST00000384431 106 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNA5SP467-201ENST00000391274 118 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU6-710P-201ENST00000410424 105 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 AC024067.1-201ENST00000426199 223 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.86□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.641-201ENST00000459414 105 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 AC097462.1-201ENST00000514125 324 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU7-128P-201ENST00000517247 62 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 AL137100.2-201ENST00000555786 315 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 MIR4255-201ENST00000579351 72 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 U6.73-201ENST00000619194 103 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.86□□□□□ -2.11
SIX4Q9UIU6 RNU6-1272P-201ENST00000362776 107 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.76-201ENST00000362931 109 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.341-201ENST00000365341 102 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.368-201ENST00000365547 113 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.85□□□□□ -2.11
SIX4Q9UIU6 RNU6-338P-201ENST00000383888 105 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.478-201ENST00000384358 107 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 RNU11-3P-201ENST00000391111 133 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 SNORA26.5-201ENST00000391215 123 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 RNU6-1186P-201ENST00000410429 97 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 RNU2-14P-201ENST00000411053 191 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 HSPE1P13-201ENST00000451143 297 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 RPS20P10-201ENST00000451209 253 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 AC015712.3-201ENST00000559380 164 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms