Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 RPEP5-201ENST00000441137 268 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 RPS4XP11-201ENST00000446897 772 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 RNU6-436P-201ENST00000516171 114 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 RN7SKP295-201ENST00000517264 153 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 MIR4423-201ENST00000580922 80 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 AL117336.2-201ENST00000602435 335 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 AC010205.1-201ENST00000616668 449 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 AC091812.1-201ENST00000432235 1948 ntBASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 MIRLET7C-201ENST00000362160 84 ntBASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 RNU6-1175P-201ENST00000365200 107 ntBASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 AL163540.1-201ENST00000485382 386 ntBASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 AC108210.2-201ENST00000503681 201 ntBASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 SNORA40.14-201ENST00000516543 86 ntBASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 AL133255.1-201ENST00000606374 441 ntBASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.41□□□□□ -2.18
CPSF2Q9P2I0 RNU6-199P-201ENST00000362954 107 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.197-201ENST00000364004 102 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 RNU4-13P-201ENST00000364019 141 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 RNU4-41P-201ENST00000364426 143 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 RNY1P14-201ENST00000384426 108 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 AL049830.1-201ENST00000468034 425 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 RNU6-922P-201ENST00000516753 99 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 RN7SKP88-201ENST00000516847 250 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 AC004832.4-201ENST00000608952 331 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 7SK.8-201ENST00000612110 250 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 7SK.11-201ENST00000615477 250 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 7SK.13-201ENST00000622040 250 ntBASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
CPSF2Q9P2I0 RNU6-60P-201ENST00000364792 103 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.458-201ENST00000384240 102 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 SNORA67.5-201ENST00000391036 107 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 RNU6-482P-201ENST00000391068 107 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 MTND1P14-201ENST00000427400 950 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 AL591806.2-201ENST00000433122 173 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 Z98949.2-201ENST00000440996 144 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 RN7SKP179-201ENST00000516126 217 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 RNU7-40P-201ENST00000516397 64 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 MIR4524B-201ENST00000581569 115 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 AL080274.1-201ENST00000605565 220 ntBASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.80-201ENST00000362996 102 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.112-201ENST00000363250 102 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 RNU6-457P-201ENST00000363999 107 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 RNU6-1080P-201ENST00000383982 107 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.485-201ENST00000384395 102 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 AC005042.3-201ENST00000453230 174 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 AC093850.1-201ENST00000454121 251 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 RNU6-917P-201ENST00000516294 104 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 RPS29P30-201ENST00000600975 111 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 AL513534.2-201ENST00000603836 250 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 AL121655.1-201ENST00000605811 308 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.772-201ENST00000606692 102 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 AC006157.1-201ENST00000611750 366 ntBASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.38□□□□□ -2.19
CPSF2Q9P2I0 U8.1-201ENST00000362843 134 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.329-201ENST00000365209 107 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 MIR653-201ENST00000385279 96 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 AL161670.1-201ENST00000554348 137 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 AC015712.3-201ENST00000559380 164 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 uc_338.22-201ENST00000622722 187 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 AC068647.2-201ENST00000637380 353 ntBASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CPSF2Q9P2I0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.509-201ENST00000384506 99 ntBASIC1.36□□□□□ -2.19
CPSF2Q9P2I0 AC022028.1-201ENST00000412054 408 ntBASIC1.36□□□□□ -2.19
CPSF2Q9P2I0 MCFD2P1-201ENST00000417812 300 ntBASIC1.36□□□□□ -2.19
CPSF2Q9P2I0 RNU6-1170P-201ENST00000515974 106 ntBASIC1.36□□□□□ -2.19
CPSF2Q9P2I0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.36□□□□□ -2.19
CPSF2Q9P2I0 AC090049.2-201ENST00000550377 109 ntBASIC1.36□□□□□ -2.19
CPSF2Q9P2I0 AC007485.1-201ENST00000616755 206 ntBASIC1.36□□□□□ -2.19
CPSF2Q9P2I0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CPSF2Q9P2I0 RNA5SP327-201ENST00000362494 101 ntBASIC1.35□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.331-201ENST00000365267 102 ntBASIC1.35□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.395-201ENST00000383945 109 ntBASIC1.35□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.462-201ENST00000384268 102 ntBASIC1.35□□□□□ -2.19
CPSF2Q9P2I0 Y_RNA.621-201ENST00000411065 96 ntBASIC1.35□□□□□ -2.19
CPSF2Q9P2I0 AL390729.2-201ENST00000416137 156 ntBASIC1.35□□□□□ -2.19
CPSF2Q9P2I0 RNU6-475P-201ENST00000516073 104 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms