Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.21□□□□□ -2.06
COL20A1Q9P218 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.21□□□□□ -2.06
COL20A1Q9P218 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.21□□□□□ -2.06
COL20A1Q9P218 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL20A1Q9P218 UBE2WP1-201ENST00000362030 340 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 Y_RNA.44-201ENST00000362676 108 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 Y_RNA.188-201ENST00000363952 111 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 RNU4-13P-201ENST00000364019 141 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 Y_RNA.307-201ENST00000365022 117 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 RNU6-117P-201ENST00000365415 107 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 Y_RNA.416-201ENST00000384014 113 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 Y_RNA.447-201ENST00000384184 113 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 SNORA40.18-201ENST00000391200 128 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 SNORA26.9-201ENST00000391322 122 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
COL20A1Q9P218 RPS26P45-201ENST00000471748 340 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 RNVU1-2-201ENST00000516326 135 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 AC136628.3-201ENST00000521868 290 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 AC073413.2-201ENST00000604332 360 ntBASIC2.2□□□□□ -2.06
COL20A1Q9P218 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
COL20A1Q9P218 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
COL20A1Q9P218 Y_RNA.310-201ENST00000365063 113 ntBASIC2.19□□□□□ -2.06
COL20A1Q9P218 Y_RNA.489-201ENST00000384410 101 ntBASIC2.19□□□□□ -2.06
COL20A1Q9P218 MIR520G-201ENST00000385064 90 ntBASIC2.19□□□□□ -2.06
COL20A1Q9P218 RPS20P10-201ENST00000451209 253 ntBASIC2.19□□□□□ -2.06
COL20A1Q9P218 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
COL20A1Q9P218 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
COL20A1Q9P218 RNU6-1023P-201ENST00000516137 106 ntBASIC2.19□□□□□ -2.06
COL20A1Q9P218 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.19□□□□□ -2.06
COL20A1Q9P218 AC084364.2-201ENST00000546924 395 ntBASIC2.19□□□□□ -2.06
COL20A1Q9P218 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.19□□□□□ -2.06
COL20A1Q9P218 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
COL20A1Q9P218 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
COL20A1Q9P218 AL162725.1-201ENST00000435405 301 ntBASIC2.18□□□□□ -2.06
COL20A1Q9P218 RPS29P11-201ENST00000496507 171 ntBASIC2.18□□□□□ -2.06
COL20A1Q9P218 AL163195.1-201ENST00000496941 348 ntBASIC2.18□□□□□ -2.06
COL20A1Q9P218 RNU7-128P-201ENST00000517247 62 ntBASIC2.18□□□□□ -2.06
COL20A1Q9P218 SUB1P4-201ENST00000566062 339 ntBASIC2.18□□□□□ -2.06
COL20A1Q9P218 AC005972.2-201ENST00000604690 348 ntBASIC2.18□□□□□ -2.06
COL20A1Q9P218 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.18□□□□□ -2.06
COL20A1Q9P218 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
COL20A1Q9P218 U6.108-201ENST00000637764 58 ntBASIC2.18□□□□□ -2.06
COL20A1Q9P218 AC018630.2-201ENST00000534866 2403 ntBASIC2.18□□□□□ -2.06
COL20A1Q9P218 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL20A1Q9P218 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
COL20A1Q9P218 Y_RNA.20-201ENST00000362479 113 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 SNORA33-201ENST00000363664 130 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 Y_RNA.275-201ENST00000364726 110 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.17□□□□□ -2.06
COL20A1Q9P218 SNORA6-201ENST00000384033 151 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 MIR583-201ENST00000384846 75 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 MIR520A-201ENST00000384862 85 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 SNORD58.1-201ENST00000391313 66 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 AL512604.1-201ENST00000404812 257 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 AL158823.1-201ENST00000418441 478 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.17□□□□□ -2.06
COL20A1Q9P218 HSPE1P21-201ENST00000438283 308 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 AC025033.1-201ENST00000463883 194 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 MTND1P19-201ENST00000511780 315 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 RNA5SP182-201ENST00000516064 82 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 RNU6-63P-201ENST00000516690 95 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 RNU7-116P-201ENST00000516940 62 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 RNU6-1271P-201ENST00000517049 105 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 BX284668.6-201ENST00000606899 438 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 AC004832.4-201ENST00000608952 331 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 AL078604.3-201ENST00000615580 211 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 MIR6079-201ENST00000635807 62 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 ZNF702P-202ENST00000434269 1966 ntBASIC2.17□□□□□ -2.06
COL20A1Q9P218 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL20A1Q9P218 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL20A1Q9P218 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
COL20A1Q9P218 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL20A1Q9P218 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
COL20A1Q9P218 RNU6-1323P-201ENST00000384025 107 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 SNORD116-13-201ENST00000384408 92 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 MIR9-3-201ENST00000385084 90 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 AC019129.1-201ENST00000403786 261 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 AL603910.2-201ENST00000407268 136 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 RNA5SP511-201ENST00000410487 115 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.16□□□□□ -2.06
COL20A1Q9P218 AL445685.2-201ENST00000422551 342 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 Y_RNA.638-201ENST00000459374 113 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 RPL23AP63-201ENST00000498752 471 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 MIR3128-201ENST00000581957 66 ntBASIC2.16□□□□□ -2.06
COL20A1Q9P218 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.16□□□□□ -2.06
COL20A1Q9P218 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL20A1Q9P218 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL20A1Q9P218 Y_RNA.217-201ENST00000364214 105 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 Y_RNA.476-201ENST00000384347 108 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 RNU6-950P-201ENST00000384651 107 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
COL20A1Q9P218 AL355497.1-201ENST00000406262 551 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 RNU2-7P-201ENST00000410794 178 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 AC245047.4-201ENST00000433189 144 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 U8.19-201ENST00000459095 133 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 Y_RNA.641-201ENST00000459414 105 ntBASIC2.15□□□□□ -2.07
COL20A1Q9P218 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms