Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC100821.1-201ENST00000523153 2479 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 UBE2WP1-201ENST00000362030 340 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 SNORA1B-201ENST00000362535 133 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.44-201ENST00000362676 108 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.193-201ENST00000363979 102 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 RNU6-1323P-201ENST00000384025 107 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 RNU6-439P-201ENST00000384188 106 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 MIR562-201ENST00000384894 95 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 COX6CP10-201ENST00000416832 224 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 snoU13.27-201ENST00000459278 104 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 RNU7-141P-201ENST00000459304 62 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 AC026436.1-201ENST00000510537 270 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 RNU2-56P-201ENST00000516826 190 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 AC024405.2-202ENST00000532731 184 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 AC011604.1-201ENST00000545978 196 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 POLR3GP1-201ENST00000594073 261 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 U2.14-201ENST00000615943 113 ntBASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LIN7CQ9NUP9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.14-201ENST00000362415 103 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 RNU6-360P-201ENST00000390944 104 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 MTCO2P33-201ENST00000402100 465 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 RN7SKP200-201ENST00000410564 320 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 HMGN2P19-201ENST00000425149 265 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 BTF3P11-201ENST00000426582 477 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 U8.19-201ENST00000459095 133 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 RNU6-1132P-201ENST00000459214 107 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 RNU7-34P-201ENST00000459394 64 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.637-201ENST00000459424 114 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 RPL23AP42-201ENST00000471152 471 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 RNU7-115P-201ENST00000516433 55 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 AP002004.2-201ENST00000531656 154 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 AP003357.1-201ENST00000604497 148 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 MIR548AY-201ENST00000617669 107 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 MIR6766-201ENST00000622641 72 ntBASIC1.89□□□□□ -2.11
LIN7CQ9NUP9 ZNF720P1-201ENST00000562403 1939 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 RNU4-82P-201ENST00000362443 140 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 RNU6-1272P-201ENST00000362776 107 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.217-201ENST00000364214 105 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.275-201ENST00000364726 110 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 SNORA72-201ENST00000384339 132 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 RNU6-950P-201ENST00000384651 107 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 SNORA67.4-201ENST00000384688 142 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.641-201ENST00000459414 105 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 SCARNA16.3-201ENST00000516595 184 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 RNU7-116P-201ENST00000516940 62 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 AC091544.4-201ENST00000555268 342 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 MIR4709-201ENST00000577272 72 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 MIR4513-201ENST00000581077 86 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 AC062037.2-201ENST00000610137 73 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 snoU18.1-201ENST00000629629 71 ntBASIC1.88□□□□□ -2.11
LIN7CQ9NUP9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.117-201ENST00000363294 101 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.265-201ENST00000364677 108 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 RNU6-740P-201ENST00000364734 105 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 RNU6-1289P-201ENST00000384431 106 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 AL603910.2-201ENST00000407268 136 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 STAG3L5P-204ENST00000443759 179 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 RPL39P38-201ENST00000467018 153 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 AL049830.1-201ENST00000468034 425 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 RPL23AP54-201ENST00000495129 419 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 MIR4435-1-201ENST00000582552 80 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 MIR5007-201ENST00000583098 95 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 AL078604.3-201ENST00000615580 211 ntBASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LIN7CQ9NUP9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 MIR449A-201ENST00000362113 91 ntBASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.54-201ENST00000362766 105 ntBASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 RNU6-899P-201ENST00000363947 107 ntBASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 AL358944.1-201ENST00000528537 144 ntBASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 AC127455.1-201ENST00000565496 145 ntBASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 SNORD53-201ENST00000579969 78 ntBASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 MIR6132-201ENST00000622083 109 ntBASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LIN7CQ9NUP9 ZNF658B-202ENST00000615961 3375 ntBASIC1.85□□□□□ -2.11
LIN7CQ9NUP9 RNU6-661P-201ENST00000362409 107 ntBASIC1.85□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.352-201ENST00000365439 102 ntBASIC1.85□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.477-201ENST00000384352 108 ntBASIC1.85□□□□□ -2.11
LIN7CQ9NUP9 Y_RNA.562-201ENST00000384695 113 ntBASIC1.85□□□□□ -2.11
LIN7CQ9NUP9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms