Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.84□□□□□ -2.11
PCDH9Q9HC56 Y_RNA.54-201ENST00000362766 105 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 Y_RNA.172-201ENST00000363765 102 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RNU6-326P-201ENST00000365480 107 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 U8.13-201ENST00000390842 128 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 SNORA40.18-201ENST00000391200 128 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RNU2-61P-201ENST00000411069 191 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RPS26P55-201ENST00000471178 356 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RNU6-191P-201ENST00000516295 94 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RNVU1-2-201ENST00000516326 135 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RNU1-142P-201ENST00000516682 145 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RNU7-172P-201ENST00000517125 64 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.84□□□□□ -2.11
PCDH9Q9HC56 MIR3618-201ENST00000580330 88 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 AC062037.2-201ENST00000610137 73 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 U6.73-201ENST00000619194 103 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 AC127459.3-201ENST00000624328 466 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 AC006435.5-201ENST00000624486 112 ntBASIC1.84□□□□□ -2.11
PCDH9Q9HC56 RNU6-662P-201ENST00000384253 104 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 SNORA8-201ENST00000384574 139 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 RNU6-376P-201ENST00000384731 106 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 RNA5SP450-201ENST00000411206 102 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 EBAG9P1-201ENST00000418955 543 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.668-201ENST00000516233 93 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 AC004817.2-201ENST00000561794 651 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 AL359075.3-201ENST00000613288 217 ntBASIC1.83□□□□□ -2.12
PCDH9Q9HC56 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PCDH9Q9HC56 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
PCDH9Q9HC56 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.14-201ENST00000362415 103 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 RNU1-22P-201ENST00000363334 158 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.136-201ENST00000363444 102 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.341-201ENST00000365341 102 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.82□□□□□ -2.12
PCDH9Q9HC56 SNORD116-13-201ENST00000384408 92 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 MIR9-3-201ENST00000385084 90 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 RNU6-710P-201ENST00000410424 105 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 CST2P1-201ENST00000425770 87 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 AC091959.1-201ENST00000495857 238 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 AC097462.1-201ENST00000514125 324 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 AC073413.2-201ENST00000604332 360 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 AC010900.2-201ENST00000604508 210 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 AP000942.4-201ENST00000604811 241 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.82□□□□□ -2.12
PCDH9Q9HC56 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.307-201ENST00000365022 117 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PCDH9Q9HC56 MIR1289-2-201ENST00000408360 111 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 RNA5SP511-201ENST00000410487 115 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 AL158823.1-201ENST00000418441 478 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 RPL39P38-201ENST00000467018 153 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 AL163195.1-201ENST00000496941 348 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 RNU7-99P-201ENST00000516271 62 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.673-201ENST00000516306 88 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.81□□□□□ -2.12
PCDH9Q9HC56 MIR6845-201ENST00000613182 61 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 AL773524.1-201ENST00000614065 229 ntBASIC1.81□□□□□ -2.12
PCDH9Q9HC56 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PCDH9Q9HC56 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
PCDH9Q9HC56 MIR335-201ENST00000362173 94 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.44-201ENST00000362676 108 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.117-201ENST00000363294 101 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 SNORD27-201ENST00000363981 72 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 RNU6-1048P-201ENST00000364054 107 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.277-201ENST00000364754 102 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 RNU6-1248P-201ENST00000391096 64 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 AL603910.2-201ENST00000407268 136 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 AL135790.2-201ENST00000437701 267 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 RNA5SP57-201ENST00000459463 123 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 RNU6-1278P-201ENST00000516130 107 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 SNORA27.4-201ENST00000516650 95 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 RNU6-295P-201ENST00000516901 104 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 RNU7-128P-201ENST00000517247 62 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 MIR3128-201ENST00000581957 66 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.8□□□□□ -2.12
PCDH9Q9HC56 U6.108-201ENST00000637764 58 ntBASIC1.8□□□□□ -2.12
PCDH9Q9HC56 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PCDH9Q9HC56 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
PCDH9Q9HC56 AC134026.1-201ENST00000623249 2239 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 SNORD114-7-201ENST00000362520 77 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 RNU4-13P-201ENST00000364019 141 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.350-201ENST00000365409 98 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.401-201ENST00000383965 117 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.518-201ENST00000384552 113 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.79□□□□□ -2.12
PCDH9Q9HC56 RPS20P10-201ENST00000451209 253 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 MTND4LP30-201ENST00000454092 297 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 AC084364.2-201ENST00000546924 395 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 AC069114.2-201ENST00000604699 304 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms