Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 SNORD42.2-201ENST00000365570 69 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.394-201ENST00000383942 103 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 RNU6-136P-201ENST00000384663 107 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 RNU6-376P-201ENST00000384731 106 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 RNU6-308P-201ENST00000390957 107 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 AL031003.1-201ENST00000404229 172 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 MIR1287-201ENST00000408492 90 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 RN7SKP200-201ENST00000410564 320 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 RPS27P16-201ENST00000425758 201 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 SDAD1P3-201ENST00000427380 333 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 RNU7-94P-201ENST00000459576 63 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 MIR3660-201ENST00000584845 100 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 AC006157.1-201ENST00000611750 366 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 AL021879.1-201ENST00000611756 288 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 AC127459.3-201ENST00000624328 466 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 AC091895.1-201ENST00000624494 256 ntBASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
RPF1Q9H9Y2 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.31-201ENST00000362574 102 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.395-201ENST00000383945 109 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.446-201ENST00000384178 104 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 RNU6-950P-201ENST00000384651 107 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 MIR499A-201ENST00000384903 122 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 AL160004.2-201ENST00000432935 350 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 RNU6-1291P-201ENST00000516591 104 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 MIR3937-201ENST00000580135 106 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 PRR13P7-201ENST00000605538 430 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.38□□□□□ -2.19
RPF1Q9H9Y2 MTND4P29-201ENST00000503122 1372 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 AC091812.1-201ENST00000432235 1948 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 SNORD114-7-201ENST00000362520 77 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 SNORA1B-201ENST00000362535 133 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.172-201ENST00000363765 102 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.813-201ENST00000364639 102 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.267-201ENST00000364679 109 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.458-201ENST00000384240 102 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 RNU6-505P-201ENST00000384427 107 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 MIR513A1-201ENST00000385138 129 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 RNA5SP511-201ENST00000410487 115 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 RNU5A-5P-201ENST00000411054 116 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 AC022028.1-201ENST00000412054 408 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 AL135790.2-201ENST00000437701 267 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 RPEP5-201ENST00000441137 268 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 STAG3L5P-204ENST00000443759 179 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 SUMO1P2-201ENST00000452524 304 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.639-201ENST00000458981 102 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 RNU6-1337P-201ENST00000516525 95 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 SNORA40.14-201ENST00000516543 86 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 SUMO2P16-201ENST00000519475 264 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 RPL21P9-201ENST00000556149 474 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 AC010205.1-201ENST00000616668 449 ntBASIC1.37□□□□□ -2.19
RPF1Q9H9Y2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.570-201ENST00000384750 101 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 HMGN1P7-201ENST00000491722 313 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 RNU6-1170P-201ENST00000515974 106 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 RNU6-1278P-201ENST00000516130 107 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 RNU6-436P-201ENST00000516171 114 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 RNU6-155P-201ENST00000516347 100 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 RNU6-341P-201ENST00000516973 96 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 MIR4423-201ENST00000580922 80 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 AC022441.3-201ENST00000605737 136 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 AL365434.2-201ENST00000607979 234 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.36□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.230-201ENST00000364348 109 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 RNU6-1175P-201ENST00000365200 107 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 SNORD116-13-201ENST00000384408 92 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 AL034345.1-201ENST00000407768 123 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.604-201ENST00000410574 102 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 MCFD2P1-201ENST00000417812 300 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 RPL30P13-201ENST00000418873 348 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 PGBD4P5-201ENST00000445958 426 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 MTND4P19-201ENST00000446659 478 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 AC006380.1-201ENST00000603598 186 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 AL078604.3-201ENST00000615580 211 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 AC005592.1-201ENST00000566527 1640 ntBASIC1.35□□□□□ -2.19
RPF1Q9H9Y2 Y_RNA.61-201ENST00000362835 102 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 RNA5SP259-201ENST00000365541 109 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 RNU6-474P-201ENST00000384243 107 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 RNU2-61P-201ENST00000411069 191 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 RNU6-130P-201ENST00000411112 103 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 AL354751.2-201ENST00000415471 210 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 PMCHL1-202ENST00000423102 261 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 CALM2P4-201ENST00000430810 426 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 AC010655.3-201ENST00000478818 450 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 RPL30P7-201ENST00000479312 323 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms