Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 AL049830.1-201ENST00000468034 425 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-1170P-201ENST00000515974 106 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-436P-201ENST00000516171 114 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 RNA5SP168-201ENST00000516642 112 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 AL353997.5-201ENST00000618886 171 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.31-201ENST00000362574 102 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 AC022028.1-201ENST00000412054 408 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 SNX2P2-201ENST00000424553 323 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 RPS29P28-201ENST00000446439 141 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 OR9P1P-201ENST00000496431 281 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 AC015720.1-201ENST00000565251 277 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 SNORA28-201ENST00000606769 126 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 uc_338.22-201ENST00000622722 187 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 AL008636.1-201ENST00000625038 1018 ntBASIC1.27□□□□□ -2.21
VIPAS39Q9H9C1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 RNU1-115P-201ENST00000365329 160 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.509-201ENST00000384506 99 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 RNU11-5P-201ENST00000391216 129 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 SUMO1P2-201ENST00000452524 304 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 AC092991.1-201ENST00000477176 376 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 SNORA70.12-201ENST00000516084 153 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 AP002004.2-201ENST00000531656 154 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 AL162424.1-201ENST00000602325 221 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 AC022441.3-201ENST00000605737 136 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.772-201ENST00000606692 102 ntBASIC1.26□□□□□ -2.21
VIPAS39Q9H9C1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 SNORD33-201ENST00000362761 85 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 RNU6-457P-201ENST00000363999 107 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 RNA5SP99-201ENST00000364020 114 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 RNU4-41P-201ENST00000364426 143 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 RNU6-937P-201ENST00000384325 106 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 MIR520G-201ENST00000385064 90 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 MIR660-201ENST00000385235 97 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 RNU4-30P-201ENST00000410245 143 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 RPS4XP11-201ENST00000446897 772 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 SNORD13-201ENST00000459299 104 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 SNORA40.14-201ENST00000516543 86 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 RN7SKP295-201ENST00000517264 153 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 MIR3124-201ENST00000582636 67 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 C8orf59P2-201ENST00000603441 271 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 AL513423.1-201ENST00000621695 132 ntBASIC1.25□□□□□ -2.21
VIPAS39Q9H9C1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 RNU1-17P-201ENST00000363022 152 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 SNORD68-201ENST00000363214 84 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.471-201ENST00000384312 102 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 RNU6-424P-201ENST00000384367 105 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.570-201ENST00000384750 101 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 AL162725.1-201ENST00000435405 301 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 Z98949.2-201ENST00000440996 144 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 RNU7-12P-201ENST00000516030 62 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 RNU6-922P-201ENST00000516753 99 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 RNU7-110P-201ENST00000516891 62 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 AC040926.1-201ENST00000530195 238 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 AL512310.8-201ENST00000550183 120 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 AC090971.5-201ENST00000621102 293 ntBASIC1.24□□□□□ -2.21
VIPAS39Q9H9C1 RNU4-76P-201ENST00000364509 141 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 SNORD14.1-201ENST00000365609 90 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.394-201ENST00000383942 103 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 Y_RNA.445-201ENST00000384168 102 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 MIR562-201ENST00000384894 95 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 RNU2-61P-201ENST00000411069 191 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 MCFD2P1-201ENST00000417812 300 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 HSPE1P13-201ENST00000451143 297 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 MIR3145-201ENST00000580727 82 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 AL121655.1-201ENST00000605811 308 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 AC010205.1-201ENST00000616668 449 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 AL138825.1-201ENST00000618587 192 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.23□□□□□ -2.21
VIPAS39Q9H9C1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 259.1 ms