Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNU6-1164P-201ENST00000364428 107 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 RNU6-923P-201ENST00000364753 107 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 RNU6-211P-201ENST00000384047 107 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 AL355796.1-201ENST00000406706 323 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 Y_RNA.590-201ENST00000410140 107 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 TOMM22P2-201ENST00000430735 237 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 SUMO1P3-201ENST00000439961 304 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 AC074198.2-201ENST00000508153 258 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.12□□□□□ -2.07
CDT1Q9H211 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CDT1Q9H211 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
CDT1Q9H211 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 Y_RNA.29-201ENST00000362570 113 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 Y_RNA.124-201ENST00000363339 93 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 RNU6-1235P-201ENST00000384559 107 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 SNORA80E-201ENST00000384744 137 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 U8.13-201ENST00000390842 128 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 RNU6-763P-201ENST00000390865 106 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 SNORA26.5-201ENST00000391215 123 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 COX6CP10-201ENST00000416832 224 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 MTND2P29-201ENST00000438595 412 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 AL357134.1-201ENST00000445848 426 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 RNU6-498P-201ENST00000459468 107 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 RNU6-221P-201ENST00000459541 99 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 Y_RNA.679-201ENST00000516416 91 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 RNA5SP137-201ENST00000516833 135 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 MIR4308-201ENST00000580634 81 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 AC007229.1-201ENST00000590455 412 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 AC002984.1-201ENST00000591692 448 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
CDT1Q9H211 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDT1Q9H211 AC134026.1-201ENST00000623249 2239 ntBASIC2.11□□□□□ -2.07
CDT1Q9H211 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDT1Q9H211 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDT1Q9H211 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.1□□□□□ -2.07
CDT1Q9H211 RNU6-682P-201ENST00000363843 106 ntBASIC2.1□□□□□ -2.07
CDT1Q9H211 Y_RNA.361-201ENST00000365515 120 ntBASIC2.1□□□□□ -2.07
CDT1Q9H211 RNU6-918P-201ENST00000391219 106 ntBASIC2.1□□□□□ -2.07
CDT1Q9H211 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.1□□□□□ -2.07
CDT1Q9H211 AC245102.2-201ENST00000448956 180 ntBASIC2.1□□□□□ -2.07
CDT1Q9H211 RNU6-182P-201ENST00000516970 105 ntBASIC2.1□□□□□ -2.07
CDT1Q9H211 AC037487.3-201ENST00000606668 112 ntBASIC2.1□□□□□ -2.07
CDT1Q9H211 AL365265.1-201ENST00000621045 234 ntBASIC2.1□□□□□ -2.07
CDT1Q9H211 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CDT1Q9H211 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDT1Q9H211 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CDT1Q9H211 RNA5SP493-201ENST00000364115 91 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 RNU6-514P-201ENST00000384208 107 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 RNU6-886P-201ENST00000384319 105 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 RNU6-160P-201ENST00000384591 107 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 AC024067.1-201ENST00000426199 223 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 SUMO1P2-201ENST00000452524 304 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.09□□□□□ -2.07
CDT1Q9H211 RNU2-34P-201ENST00000516534 121 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 RNU6-861P-201ENST00000516745 106 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 AC025647.1-201ENST00000517879 253 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.09□□□□□ -2.07
CDT1Q9H211 MIR4529-201ENST00000578110 78 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 AC006380.1-201ENST00000603598 186 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 AC098479.1-201ENST00000609225 154 ntBASIC2.09□□□□□ -2.07
CDT1Q9H211 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.09□□□□□ -2.07
CDT1Q9H211 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.09□□□□□ -2.07
CDT1Q9H211 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
CDT1Q9H211 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDT1Q9H211 AC009487.4-201ENST00000624969 3585 ntBASIC2.09□□□□□ -2.08
CDT1Q9H211 Y_RNA.4-201ENST00000362333 112 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 RNU6-1272P-201ENST00000362776 107 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 RNU6-653P-201ENST00000363074 106 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 RNU4-10P-201ENST00000364383 140 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 Y_RNA.308-201ENST00000365043 101 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 Y_RNA.572-201ENST00000384757 98 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 AC019129.1-201ENST00000403786 261 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 Y_RNA.793-201ENST00000411222 111 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 AC016909.1-201ENST00000415916 166 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 AC060773.1-201ENST00000421698 310 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 BTF3P11-201ENST00000426582 477 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 AC003989.2-201ENST00000440224 169 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 AL138752.1-201ENST00000452964 351 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 SNORD65B-201ENST00000459126 73 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 RNU6-856P-201ENST00000516959 98 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 AC027419.1-201ENST00000522976 328 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.08□□□□□ -2.08
CDT1Q9H211 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 MIR7111-201ENST00000619751 72 ntBASIC2.08□□□□□ -2.08
CDT1Q9H211 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.08□□□□□ -2.08
CDT1Q9H211 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CDT1Q9H211 AC245060.5-201ENST00000610778 3293 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 Y_RNA.164-201ENST00000363709 102 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 SNORA16B-201ENST00000364674 135 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms