Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 Y_RNA.121-201ENST00000363309 113 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 RNU4-13P-201ENST00000364019 141 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 RNU1-96P-201ENST00000364163 162 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 MIR526A2-201ENST00000390198 65 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 AL603908.1-201ENST00000406098 201 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 SUMO1P4-201ENST00000429430 302 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 AL353689.1-201ENST00000438895 199 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 AC108210.2-201ENST00000503681 201 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 AC074198.2-201ENST00000508153 258 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 AC097462.1-201ENST00000514125 324 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-1278P-201ENST00000516130 107 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-1219P-201ENST00000516143 112 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 AC015720.1-201ENST00000565251 277 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 MIR6817-201ENST00000615588 66 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 RNU1-51P-201ENST00000365345 176 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-381P-201ENST00000391259 108 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 RNU2-2P-201ENST00000410396 191 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 snoU13.23-201ENST00000458863 104 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 snoU13.15-201ENST00000459407 104 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 RNU1-41P-201ENST00000516161 162 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 RNU1-48P-201ENST00000516400 162 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 MIR4724-201ENST00000579485 89 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 AL049779.4-201ENST00000604500 156 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 RNU2-4P-201ENST00000606190 192 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 MIR338-201ENST00000636369 67 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 AC245060.5-201ENST00000610778 3293 ntBASIC2.29□□□□□ -2.04
AMBRA1Q9C0C7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-969P-201ENST00000383900 105 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.572-201ENST00000384757 98 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-482P-201ENST00000391068 107 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 EBAG9P1-201ENST00000418955 543 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 SUMO1P3-201ENST00000439961 304 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 RPL23AP54-201ENST00000495129 419 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 RPS29P21-201ENST00000496272 170 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 RN7SKP164-201ENST00000516138 266 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 IGKV3-31-201ENST00000523109 329 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 AC127455.1-201ENST00000565496 145 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 MIR3126-201ENST00000577443 74 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 FO624990.1-201ENST00000636373 85 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 AC005336.3-201ENST00000623833 2679 ntBASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
AMBRA1Q9C0C7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.28□□□□□ -2.05
AMBRA1Q9C0C7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
AMBRA1Q9C0C7 ZNF658B-202ENST00000615961 3375 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RNA5SP393-201ENST00000363423 117 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RNA5SP493-201ENST00000364115 91 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 snoU2_19.4-201ENST00000364329 80 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-312P-201ENST00000364629 107 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-376P-201ENST00000384731 106 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RNA5SP467-201ENST00000391274 118 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-383P-201ENST00000410864 94 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RN7SL636P-201ENST00000497504 294 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 RNU7-99P-201ENST00000516271 62 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 MIR5194-201ENST00000582634 120 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 AC022202.1-201ENST00000613515 211 ntBASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.27□□□□□ -2.05
AMBRA1Q9C0C7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-103P-201ENST00000363686 107 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 Y_RNA.182-201ENST00000363880 111 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 RNA5SP68-201ENST00000363885 119 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 RNU1-91P-201ENST00000364746 163 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 SNORA72-201ENST00000384339 132 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 MIR616-201ENST00000385293 97 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 RNA5SP425-201ENST00000410336 112 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 Y_RNA.797-201ENST00000515977 94 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 MIR4744-201ENST00000581563 82 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 AC007229.1-201ENST00000590455 412 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 AL353149.1-201ENST00000610667 244 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.26□□□□□ -2.05
AMBRA1Q9C0C7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 MIR367-201ENST00000362299 68 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 Y_RNA.75-201ENST00000362927 97 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-674P-201ENST00000363831 107 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 RNU1-148P-201ENST00000384472 162 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 MIR27B-201ENST00000385129 97 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 AL117342.1-201ENST00000404861 406 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 MIR548M-201ENST00000408260 86 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms