Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC055731.1-201ENST00000474387 401 ntBASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 AL163195.1-201ENST00000496941 348 ntBASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 RNU4-71P-201ENST00000516258 113 ntBASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 Y_RNA.777-201ENST00000516982 102 ntBASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 Y_RNA.771-201ENST00000598668 102 ntBASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 Y_RNA.789-201ENST00000622480 102 ntBASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 snoU18.1-201ENST00000629629 71 ntBASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 U6.108-201ENST00000637764 58 ntBASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM54Q9BYV2 AC018630.2-201ENST00000534866 2403 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 RNU4-82P-201ENST00000362443 140 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 RNU6-1323P-201ENST00000384025 107 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.515-201ENST00000384535 112 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 AC104332.1-201ENST00000440471 797 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 RNU7-141P-201ENST00000459304 62 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 RNVU1-2-201ENST00000516326 135 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 RNU6-388P-201ENST00000517012 105 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 RNU6-389P-201ENST00000517048 105 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 RNU6-111P-201ENST00000517179 105 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 AC005357.1-201ENST00000588399 301 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 MIR548AY-201ENST00000617669 107 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
TRIM54Q9BYV2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 AC134026.1-201ENST00000623249 2239 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.122-201ENST00000363331 96 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 RNU6-1048P-201ENST00000364054 107 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 RNU6-211P-201ENST00000384047 107 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.539-201ENST00000384635 107 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 SNORA67.4-201ENST00000384688 142 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 RNU6-847P-201ENST00000411115 108 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.637-201ENST00000459424 114 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 TRBV12-1-201ENST00000479785 344 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 AC117454.1-201ENST00000491120 168 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 RNA5SP281-201ENST00000516504 135 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 RNU6-1096P-201ENST00000517089 102 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 AC084364.2-201ENST00000546924 395 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 MIR4643-201ENST00000577473 78 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 POLR3GP1-201ENST00000594073 261 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 AP003357.1-201ENST00000604497 148 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 AC013791.1-201ENST00000616619 62 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 AC073349.3-201ENST00000617616 186 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 MIR6079-201ENST00000635807 62 ntBASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
TRIM54Q9BYV2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.269-201ENST00000364685 89 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 RNA5SP37-201ENST00000365420 130 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 RNU6-338P-201ENST00000383888 105 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 RNU2-14P-201ENST00000411053 191 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 SNORD2.1-201ENST00000458762 69 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 U8.19-201ENST00000459095 133 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.638-201ENST00000459374 113 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 AC091021.1-201ENST00000468051 388 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 RNU7-115P-201ENST00000516433 55 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 AC024405.2-202ENST00000532731 184 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 MIR4282-201ENST00000583613 67 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 AL008718.3-201ENST00000610217 321 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 AL442067.1-201ENST00000613261 223 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 AC009831.4-201ENST00000620744 325 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.19□□□□□ -2.06
TRIM54Q9BYV2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 U8.7-201ENST00000364940 136 ntBASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 SNORA72-201ENST00000384339 132 ntBASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 SNORD58.1-201ENST00000391313 66 ntBASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 RNU2-7P-201ENST00000410794 178 ntBASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 RNU6-651P-201ENST00000411040 105 ntBASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 RPS4XP11-201ENST00000446897 772 ntBASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 MIR5692C2-201ENST00000577959 77 ntBASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 AC141273.2-201ENST00000618989 130 ntBASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM54Q9BYV2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.267-201ENST00000364679 109 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 MIR221-201ENST00000385135 110 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 AC245047.4-201ENST00000433189 144 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 RPL23AP54-201ENST00000495129 419 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 RNU6-341P-201ENST00000516973 96 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 AC127455.1-201ENST00000565496 145 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 SUB1P4-201ENST00000566062 339 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 SNORD53-201ENST00000579969 78 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms