Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RN7SKP167-201ENST00000411047 285 ntBASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 AC008413.1-201ENST00000511864 177 ntBASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 AC079598.5-201ENST00000547460 117 ntBASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 U4atac.1-201ENST00000618345 95 ntBASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 MIR4727-201ENST00000622232 55 ntBASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 RNU1-18P-201ENST00000363062 164 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 RNU6-509P-201ENST00000363519 107 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 SNORA14A-201ENST00000364773 135 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 RNU6-234P-201ENST00000365229 104 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.467-201ENST00000384297 102 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 MIR548O-201ENST00000408583 114 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 AC099677.2-201ENST00000436385 175 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 AL109933.2-201ENST00000452651 260 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 RNA5SP208-201ENST00000516156 78 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 RNA5SP468-201ENST00000516782 93 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 AC087685.1-201ENST00000587507 141 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 uc_338.32-201ENST00000615087 172 ntBASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL25A1Q9BXS0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.191-201ENST00000363972 113 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 RNA5SP99-201ENST00000364020 114 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.377-201ENST00000365644 108 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.440-201ENST00000384120 114 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 MIR1294-201ENST00000408503 142 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 AL591806.2-201ENST00000433122 173 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 AC245517.4-201ENST00000448601 281 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 SNRPGP5-201ENST00000456003 220 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 RN7SKP132-201ENST00000516001 208 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 MIR2682-201ENST00000580305 110 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 AL359075.3-201ENST00000613288 217 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 AC064859.1-201ENST00000624741 174 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 LINC02471-203ENST00000641941 4752 ntBASIC3.54□□□□□ -1.84
COL25A1Q9BXS0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 ZNF271P-202ENST00000465539 1970 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 RNU6-50P-201ENST00000362356 103 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.37-201ENST00000362606 108 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 SNORD116-10-201ENST00000363791 102 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 RNU6-743P-201ENST00000364151 106 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 RNU6-679P-201ENST00000391003 106 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 RNU4-69P-201ENST00000410677 143 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 RNU2-40P-201ENST00000410833 196 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 snoU13.28-201ENST00000459235 104 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 RPS23P4-201ENST00000487908 423 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 AC078918.1-201ENST00000498515 228 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 HSPE1P19-201ENST00000603327 295 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 AC022217.4-201ENST00000604389 163 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 AC046143.2-201ENST00000609789 160 ntBASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL25A1Q9BXS0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 MIR1183-201ENST00000408856 89 ntBASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 RN7SKP111-201ENST00000410349 271 ntBASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 RPL36AP48-201ENST00000485521 314 ntBASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 AC008885.1-201ENST00000514930 301 ntBASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 SNORD36C-201ENST00000516733 66 ntBASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 AC100770.1-201ENST00000532310 322 ntBASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 MIR3609-201ENST00000582661 80 ntBASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 AL591424.2-201ENST00000617023 128 ntBASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 AC095038.3-201ENST00000634439 195 ntBASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
COL25A1Q9BXS0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 U8.2-201ENST00000363156 134 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 SNORD115-28-201ENST00000363931 81 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 SNORD74.4-201ENST00000364129 80 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 MIR607-201ENST00000385241 96 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 RNA5SP129-201ENST00000410276 118 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 RNU2-34P-201ENST00000516534 121 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 MIR4712-201ENST00000583750 82 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 AL513534.2-201ENST00000603836 250 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms