Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNU6-360P-201ENST00000390944 104 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 RNU4-30P-201ENST00000410245 143 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 FTH1P12-201ENST00000432137 551 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 MTND5P22-201ENST00000458380 195 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 LINC01399-202ENST00000458450 244 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 RPL36AP21-201ENST00000490372 323 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-496P-201ENST00000516145 99 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 RNY3P15-201ENST00000516297 97 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 SNORA31.17-201ENST00000516953 127 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 AC073413.2-201ENST00000604332 360 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 AC018630.2-201ENST00000534866 2403 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-661P-201ENST00000362409 107 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.329-201ENST00000365209 107 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-1248P-201ENST00000391096 64 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-1109P-201ENST00000391187 107 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-121P-201ENST00000410525 99 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 RNU2-7P-201ENST00000410794 178 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 OOSP1P1-201ENST00000423265 274 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 RPS27P1-201ENST00000450552 247 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 MTND4LP30-201ENST00000454092 297 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 HSPE1P25-201ENST00000455484 251 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 UBL5P3-201ENST00000475112 231 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 SCARNA15.1-201ENST00000516384 125 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 AC091544.4-201ENST00000555268 342 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 AC008737.2-201ENST00000599446 118 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 MIR7843-201ENST00000622274 79 ntBASIC1.4□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.105-201ENST00000363182 111 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.136-201ENST00000363444 102 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.383-201ENST00000383855 97 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-376P-201ENST00000384731 106 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 MIR520G-201ENST00000385064 90 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 MIR504-201ENST00000385065 83 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 POLR2KP2-201ENST00000438155 177 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 HMGN1P10-201ENST00000474557 553 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-1337P-201ENST00000516525 95 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 RNA5SP437-201ENST00000517249 129 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 AP003733.2-201ENST00000529409 171 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 AC091178.2-201ENST00000584401 117 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 AL360085.1-201ENST00000604713 532 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 AL353621.2-201ENST00000605340 133 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 MIR6845-201ENST00000613182 61 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 MIR6079-201ENST00000635807 62 ntBASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC28BQ9BUN5 U8.1-201ENST00000362843 134 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.162-201ENST00000363683 102 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.286-201ENST00000364813 102 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 RNA5SP126-201ENST00000365092 109 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-290P-201ENST00000365212 101 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.368-201ENST00000365547 113 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.456-201ENST00000384232 111 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 MIR30A-201ENST00000385092 71 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 MIR548F4-201ENST00000408515 105 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.602-201ENST00000410535 92 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 AL162725.1-201ENST00000435405 301 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 HSPE1P9-201ENST00000440046 311 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 SNORA25.15-201ENST00000516487 89 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-341P-201ENST00000516973 96 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 AL358944.1-201ENST00000528537 144 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 AL117187.1-201ENST00000555482 181 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 MIR3683-201ENST00000580847 82 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 AC136443.5-201ENST00000603741 370 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 AC022217.4-201ENST00000604389 163 ntBASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC28BQ9BUN5 snoU2_19.2-201ENST00000363024 80 ntBASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 AC245047.3-201ENST00000429428 127 ntBASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 HMGN2P23-201ENST00000456759 269 ntBASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 snoU13.27-201ENST00000459278 104 ntBASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-327P-201ENST00000516270 127 ntBASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 AL162424.1-201ENST00000602325 221 ntBASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 DEFB117-201ENST00000602356 141 ntBASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 AC099654.10-201ENST00000640395 161 ntBASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.64-201ENST00000362845 102 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-806P-201ENST00000365147 105 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-326P-201ENST00000365480 107 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 SNORA70B-201ENST00000384210 135 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-102P-201ENST00000384485 104 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.569-201ENST00000384749 103 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-713P-201ENST00000384761 107 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 RNA5SP109-201ENST00000391010 116 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms