Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
UPK3BQ9BT76 RNU7-43P-201ENST00000516554 64 ntBASIC0.23□□□□□ -2.37
UPK3BQ9BT76 SNORA18.7-201ENST00000516910 131 ntBASIC0.23□□□□□ -2.37
UPK3BQ9BT76 Y_RNA.717-201ENST00000517106 92 ntBASIC0.23□□□□□ -2.37
UPK3BQ9BT76 AC093027.1-201ENST00000546698 429 ntBASIC0.23□□□□□ -2.37
UPK3BQ9BT76 AC005730.3-201ENST00000583067 366 ntBASIC0.23□□□□□ -2.37
UPK3BQ9BT76 MIR3672-201ENST00000584290 82 ntBASIC0.23□□□□□ -2.37
UPK3BQ9BT76 MTND5P16-201ENST00000460269 1703 ntBASIC0.23□□□□□ -2.37
UPK3BQ9BT76 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
UPK3BQ9BT76 RNU6-222P-201ENST00000362438 107 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 RNY1P4-201ENST00000384595 115 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 MIR193B-201ENST00000384907 83 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 MIR1827-201ENST00000408549 66 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 RNU6-1001P-201ENST00000411265 100 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 AC010424.1-201ENST00000506336 297 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 RN7SKP164-201ENST00000516138 266 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 Y_RNA.670-201ENST00000516255 105 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 RNU6-63P-201ENST00000516690 95 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
UPK3BQ9BT76 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.22□□□□□ -2.37
UPK3BQ9BT76 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.22□□□□□ -2.37
UPK3BQ9BT76 AC104260.1-201ENST00000616660 539 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 AC008133.2-201ENST00000624540 351 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 AC124864.2-201ENST00000624736 186 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 AC100810.6-201ENST00000638068 285 ntBASIC0.22□□□□□ -2.37
UPK3BQ9BT76 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 SNORD114-7-201ENST00000362520 77 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 Y_RNA.135-201ENST00000363439 95 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 Y_RNA.212-201ENST00000364177 102 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 AC117470.1-201ENST00000381974 330 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 SNORD116-11-201ENST00000383882 92 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 RNU6-1145P-201ENST00000384246 107 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 DEFB108C-201ENST00000400154 252 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 RNA5SP511-201ENST00000410487 115 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 AC002350.1-201ENST00000490759 375 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 RNU6-1281P-201ENST00000516223 105 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 AC018448.1-201ENST00000552843 316 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 AL162413.1-201ENST00000603198 110 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 AC104695.3-201ENST00000604052 296 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 AL591926.4-201ENST00000616895 298 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 AC078883.4-201ENST00000623218 367 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 AC090582.1-201ENST00000636321 199 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 MTND5P26-201ENST00000426018 1752 ntBASIC0.21□□□□□ -2.38
UPK3BQ9BT76 MIR410-201ENST00000362222 80 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 RNU6-1084P-201ENST00000362498 107 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 U8.5-201ENST00000364528 136 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 RNU6-306P-201ENST00000384617 107 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 MIR140-201ENST00000385282 100 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 RNU6-1304P-201ENST00000411374 106 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 AL354751.2-201ENST00000415471 210 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.2□□□□□ -2.38
UPK3BQ9BT76 MRPS18CP6-201ENST00000423587 223 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 EIF1P2-201ENST00000428233 350 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 ELOCP24-201ENST00000456370 334 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.2□□□□□ -2.38
UPK3BQ9BT76 MIR4762-201ENST00000585261 75 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 NBR2-204ENST00000587322 63 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 AC005828.6-201ENST00000606610 232 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 AL359880.1-201ENST00000621879 266 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 MIR3674-201ENST00000636576 68 ntBASIC0.2□□□□□ -2.38
UPK3BQ9BT76 Y_RNA.77-201ENST00000362962 107 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 RNU6-259P-201ENST00000383999 107 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 SNORA2B-201ENST00000384583 137 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
UPK3BQ9BT76 MTND2P9-201ENST00000422293 931 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 AC005534.2-201ENST00000431047 433 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.19□□□□□ -2.38
UPK3BQ9BT76 UBE2V1P7-201ENST00000446395 340 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 AC092989.1-201ENST00000481235 277 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 SNORA68.3-201ENST00000515906 83 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 MIR1273G-201ENST00000577677 100 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 AC125232.2-201ENST00000592457 143 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 AL357075.2-201ENST00000614906 189 ntBASIC0.19□□□□□ -2.38
UPK3BQ9BT76 MIR330-201ENST00000362196 94 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 RNU6-879P-201ENST00000364328 108 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 Y_RNA.414-201ENST00000384011 101 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 RNU6-483P-201ENST00000384088 108 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 RNU6-1310P-201ENST00000384153 107 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 RNU6-1119P-201ENST00000384349 108 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 MIR190B-201ENST00000401119 79 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 RNU6-177P-201ENST00000411257 104 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.18□□□□□ -2.38
UPK3BQ9BT76 AL390729.2-201ENST00000416137 156 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 MLLT10P1-201ENST00000418346 262 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 DLGAP5P1-201ENST00000430307 464 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.18□□□□□ -2.38
UPK3BQ9BT76 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.18□□□□□ -2.38
UPK3BQ9BT76 RNU7-66P-201ENST00000459469 62 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 SNORD45.4-201ENST00000516629 73 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.18□□□□□ -2.38
UPK3BQ9BT76 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 AF250324.2-201ENST00000608299 610 ntBASIC0.18□□□□□ -2.38
UPK3BQ9BT76 MIRLET7D-201ENST00000362263 87 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 RNU6-454P-201ENST00000364292 107 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 RNU6-654P-201ENST00000364373 107 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 Y_RNA.243-201ENST00000364481 109 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 Y_RNA.364-201ENST00000365532 101 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 RNY1P8-201ENST00000383970 114 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 SNORD116-8-201ENST00000384365 95 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms