Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
NDNQ99608 MIR302D-201ENST00000362275 68 ntBASIC1.41□□□□□ -2.18
NDNQ99608 Y_RNA.28-201ENST00000362554 111 ntBASIC1.41□□□□□ -2.18
NDNQ99608 RNU1-17P-201ENST00000363022 152 ntBASIC1.41□□□□□ -2.18
NDNQ99608 RNU6-324P-201ENST00000363957 106 ntBASIC1.41□□□□□ -2.18
NDNQ99608 Y_RNA.813-201ENST00000364639 102 ntBASIC1.41□□□□□ -2.18
NDNQ99608 SNORD1A-201ENST00000364968 72 ntBASIC1.41□□□□□ -2.18
NDNQ99608 SNORA63.7-201ENST00000365579 123 ntBASIC1.41□□□□□ -2.18
NDNQ99608 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.41□□□□□ -2.18
NDNQ99608 RNU2-61P-201ENST00000411069 191 ntBASIC1.41□□□□□ -2.18
NDNQ99608 PMCHL1-202ENST00000423102 261 ntBASIC1.41□□□□□ -2.18
NDNQ99608 AC245517.4-201ENST00000448601 281 ntBASIC1.41□□□□□ -2.18
NDNQ99608 AC091021.1-201ENST00000468051 388 ntBASIC1.41□□□□□ -2.18
NDNQ99608 RNU6-436P-201ENST00000516171 114 ntBASIC1.41□□□□□ -2.18
NDNQ99608 RNU6-988P-201ENST00000519081 107 ntBASIC1.41□□□□□ -2.18
NDNQ99608 AP002004.2-201ENST00000531656 154 ntBASIC1.41□□□□□ -2.18
NDNQ99608 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.41□□□□□ -2.18
NDNQ99608 Y_RNA.31-201ENST00000362574 102 ntBASIC1.4□□□□□ -2.19
NDNQ99608 RNU6-474P-201ENST00000384243 107 ntBASIC1.4□□□□□ -2.19
NDNQ99608 Y_RNA.471-201ENST00000384312 102 ntBASIC1.4□□□□□ -2.19
NDNQ99608 Y_RNA.551-201ENST00000384661 102 ntBASIC1.4□□□□□ -2.19
NDNQ99608 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.4□□□□□ -2.19
NDNQ99608 RNU6-710P-201ENST00000410424 105 ntBASIC1.4□□□□□ -2.19
NDNQ99608 MTND1P14-201ENST00000427400 950 ntBASIC1.4□□□□□ -2.19
NDNQ99608 SNRPGP13-201ENST00000442212 177 ntBASIC1.4□□□□□ -2.19
NDNQ99608 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.4□□□□□ -2.19
NDNQ99608 AC079140.2-201ENST00000506193 142 ntBASIC1.4□□□□□ -2.19
NDNQ99608 RNU6-1337P-201ENST00000516525 95 ntBASIC1.4□□□□□ -2.19
NDNQ99608 AC022616.4-201ENST00000522985 181 ntBASIC1.4□□□□□ -2.19
NDNQ99608 MIR4303-201ENST00000581299 66 ntBASIC1.4□□□□□ -2.19
NDNQ99608 AC073349.3-201ENST00000617616 186 ntBASIC1.4□□□□□ -2.19
NDNQ99608 AL513423.1-201ENST00000621695 132 ntBASIC1.4□□□□□ -2.19
NDNQ99608 MIR8063-201ENST00000621930 81 ntBASIC1.4□□□□□ -2.19
NDNQ99608 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NDNQ99608 MTND4P29-201ENST00000503122 1372 ntBASIC1.39□□□□□ -2.19
NDNQ99608 U8.1-201ENST00000362843 134 ntBASIC1.39□□□□□ -2.19
NDNQ99608 Y_RNA.265-201ENST00000364677 108 ntBASIC1.39□□□□□ -2.19
NDNQ99608 Y_RNA.267-201ENST00000364679 109 ntBASIC1.39□□□□□ -2.19
NDNQ99608 RNU6-482P-201ENST00000391068 107 ntBASIC1.39□□□□□ -2.19
NDNQ99608 AL162725.1-201ENST00000435405 301 ntBASIC1.39□□□□□ -2.19
NDNQ99608 RPEP5-201ENST00000441137 268 ntBASIC1.39□□□□□ -2.19
NDNQ99608 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.39□□□□□ -2.19
NDNQ99608 RNU2-56P-201ENST00000516826 190 ntBASIC1.39□□□□□ -2.19
NDNQ99608 Y_RNA.721-201ENST00000517207 102 ntBASIC1.39□□□□□ -2.19
NDNQ99608 AC011373.1-201ENST00000607270 237 ntBASIC1.39□□□□□ -2.19
NDNQ99608 AL021879.1-201ENST00000611756 288 ntBASIC1.39□□□□□ -2.19
NDNQ99608 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
NDNQ99608 MIR513A1-201ENST00000385138 129 ntBASIC1.38□□□□□ -2.19
NDNQ99608 RNU6-308P-201ENST00000390957 107 ntBASIC1.38□□□□□ -2.19
NDNQ99608 RNA5SP482-201ENST00000391269 118 ntBASIC1.38□□□□□ -2.19
NDNQ99608 RNA5SP511-201ENST00000410487 115 ntBASIC1.38□□□□□ -2.19
NDNQ99608 RPL30P13-201ENST00000418873 348 ntBASIC1.38□□□□□ -2.19
NDNQ99608 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.38□□□□□ -2.19
NDNQ99608 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
NDNQ99608 RNU6-63P-201ENST00000516690 95 ntBASIC1.38□□□□□ -2.19
NDNQ99608 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.38□□□□□ -2.19
NDNQ99608 MIR4524B-201ENST00000581569 115 ntBASIC1.38□□□□□ -2.19
NDNQ99608 MIR6715A-201ENST00000615929 79 ntBASIC1.38□□□□□ -2.19
NDNQ99608 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.38□□□□□ -2.19
NDNQ99608 Y_RNA.148-201ENST00000363557 117 ntBASIC1.37□□□□□ -2.19
NDNQ99608 Y_RNA.331-201ENST00000365267 102 ntBASIC1.37□□□□□ -2.19
NDNQ99608 AC117470.1-201ENST00000381974 330 ntBASIC1.37□□□□□ -2.19
NDNQ99608 RNU6-136P-201ENST00000384663 107 ntBASIC1.37□□□□□ -2.19
NDNQ99608 AL354751.2-201ENST00000415471 210 ntBASIC1.37□□□□□ -2.19
NDNQ99608 AC024067.1-201ENST00000426199 223 ntBASIC1.37□□□□□ -2.19
NDNQ99608 MTCO2P12-201ENST00000427426 682 ntBASIC1.37□□□□□ -2.19
NDNQ99608 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
NDNQ99608 STAG3L5P-204ENST00000443759 179 ntBASIC1.37□□□□□ -2.19
NDNQ99608 RNU6-966P-201ENST00000516479 104 ntBASIC1.37□□□□□ -2.19
NDNQ99608 RNU7-110P-201ENST00000516891 62 ntBASIC1.37□□□□□ -2.19
NDNQ99608 RNU6-1096P-201ENST00000517089 102 ntBASIC1.37□□□□□ -2.19
NDNQ99608 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
NDNQ99608 AC124312.5-201ENST00000604451 268 ntBASIC1.37□□□□□ -2.19
NDNQ99608 AC040896.1-201ENST00000613819 479 ntBASIC1.37□□□□□ -2.19
NDNQ99608 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
NDNQ99608 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
NDNQ99608 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
NDNQ99608 SNORA1B-201ENST00000362535 133 ntBASIC1.36□□□□□ -2.19
NDNQ99608 Y_RNA.143-201ENST00000363520 106 ntBASIC1.36□□□□□ -2.19
NDNQ99608 RNU6-457P-201ENST00000363999 107 ntBASIC1.36□□□□□ -2.19
NDNQ99608 Y_RNA.329-201ENST00000365209 107 ntBASIC1.36□□□□□ -2.19
NDNQ99608 Y_RNA.645-201ENST00000391229 102 ntBASIC1.36□□□□□ -2.19
NDNQ99608 MIR548P-201ENST00000408336 84 ntBASIC1.36□□□□□ -2.19
NDNQ99608 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.36□□□□□ -2.19
NDNQ99608 AL049830.1-201ENST00000468034 425 ntBASIC1.36□□□□□ -2.19
NDNQ99608 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.36□□□□□ -2.19
NDNQ99608 RNU6-1291P-201ENST00000516591 104 ntBASIC1.36□□□□□ -2.19
NDNQ99608 PRR13P7-201ENST00000605538 430 ntBASIC1.36□□□□□ -2.19
NDNQ99608 AL353997.5-201ENST00000618886 171 ntBASIC1.36□□□□□ -2.19
NDNQ99608 Y_RNA.11-201ENST00000362375 109 ntBASIC1.35□□□□□ -2.19
NDNQ99608 Y_RNA.394-201ENST00000383942 103 ntBASIC1.35□□□□□ -2.19
NDNQ99608 RNU6-937P-201ENST00000384325 106 ntBASIC1.35□□□□□ -2.19
NDNQ99608 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
NDNQ99608 RNU6-21P-201ENST00000384710 107 ntBASIC1.35□□□□□ -2.19
NDNQ99608 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
NDNQ99608 SNORA12.1-201ENST00000390873 148 ntBASIC1.35□□□□□ -2.19
NDNQ99608 SNORA17.3-201ENST00000391159 129 ntBASIC1.35□□□□□ -2.19
NDNQ99608 RNU6-101P-201ENST00000410323 104 ntBASIC1.35□□□□□ -2.19
NDNQ99608 AC015922.2-201ENST00000435593 184 ntBASIC1.35□□□□□ -2.19
NDNQ99608 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms