Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 AC005776.1-201ENST00000603164 290 ntBASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 OR4H6P-202ENST00000603819 340 ntBASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 MTND2P41-201ENST00000637599 773 ntBASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 MIR5693-201ENST00000577722 73 ntBASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 SNORD115-13-201ENST00000363358 82 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 RNU6-205P-201ENST00000390858 107 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 RNU2-43P-201ENST00000410306 190 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 AC113420.1-201ENST00000507903 571 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 RNU6-1183P-201ENST00000517054 60 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 AC022306.2-201ENST00000617563 647 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 AC018926.3-201ENST00000618841 406 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 RNU6-1010P-201ENST00000362757 107 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 Y_RNA.617-201ENST00000410920 90 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 RNU7-62P-201ENST00000458856 62 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 AC063943.3-201ENST00000615562 356 ntBASIC-2.39□□□□□ -2.79
VPS13AQ96RL7 SNRPGP8-201ENST00000454064 226 ntBASIC-2.4□□□□□ -2.79
VPS13AQ96RL7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-2.4□□□□□ -2.79
VPS13AQ96RL7 AC022893.3-201ENST00000607665 437 ntBASIC-2.4□□□□□ -2.79
VPS13AQ96RL7 MIR376A2-201ENST00000636782 80 ntBASIC-2.4□□□□□ -2.79
VPS13AQ96RL7 SNORD115-10-201ENST00000365073 81 ntBASIC-2.4□□□□□ -2.79
VPS13AQ96RL7 RNY3P4-201ENST00000384428 101 ntBASIC-2.41□□□□□ -2.79
VPS13AQ96RL7 AC106883.1-201ENST00000418805 562 ntBASIC-2.41□□□□□ -2.79
VPS13AQ96RL7 TIMM9P3-201ENST00000428659 274 ntBASIC-2.41□□□□□ -2.79
VPS13AQ96RL7 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.41□□□□□ -2.79
VPS13AQ96RL7 AL671309.1-201ENST00000603750 544 ntBASIC-2.41□□□□□ -2.79
VPS13AQ96RL7 AC022217.4-201ENST00000604389 163 ntBASIC-2.41□□□□□ -2.79
VPS13AQ96RL7 AL161798.1-201ENST00000604630 131 ntBASIC-2.41□□□□□ -2.79
VPS13AQ96RL7 RNU4-92P-201ENST00000363783 136 ntBASIC-2.41□□□□□ -2.8
VPS13AQ96RL7 RNU6-532P-201ENST00000384318 107 ntBASIC-2.41□□□□□ -2.8
VPS13AQ96RL7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-2.41□□□□□ -2.8
VPS13AQ96RL7 SNORD75.2-201ENST00000408784 58 ntBASIC-2.41□□□□□ -2.8
VPS13AQ96RL7 PMCHL1-202ENST00000423102 261 ntBASIC-2.41□□□□□ -2.8
VPS13AQ96RL7 Y_RNA.32-201ENST00000362589 110 ntBASIC-2.41□□□□□ -2.8
VPS13AQ96RL7 RNU6-746P-201ENST00000384112 109 ntBASIC-2.41□□□□□ -2.8
VPS13AQ96RL7 RPS29P13-201ENST00000402041 169 ntBASIC-2.41□□□□□ -2.8
VPS13AQ96RL7 AC079416.3-201ENST00000624479 549 ntBASIC-2.41□□□□□ -2.8
VPS13AQ96RL7 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 RNU6-509P-201ENST00000363519 107 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 RNU6-873P-201ENST00000363833 107 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 AL109755.1-201ENST00000401791 649 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 AC018880.2-201ENST00000414265 201 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 AC009994.1-201ENST00000606889 253 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 AL121978.1-201ENST00000402778 359 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 RNU7-43P-201ENST00000516554 64 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 Y_RNA.704-201ENST00000516851 102 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 MIR4504-201ENST00000577413 92 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 AL049861.1-201ENST00000603130 150 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 snoR1.1-201ENST00000628177 80 ntBASIC-2.42□□□□□ -2.8
VPS13AQ96RL7 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 AC005771.1-201ENST00000585581 349 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 AC010999.1-201ENST00000611856 324 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 RNA5SP26-201ENST00000362406 119 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 RNU4-10P-201ENST00000364383 140 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 MIR19A-201ENST00000384878 82 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 AL359672.1-201ENST00000442302 409 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 RNU6-323P-201ENST00000521915 107 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 AC068339.1-201ENST00000526965 141 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 AC099785.1-201ENST00000605697 437 ntBASIC-2.43□□□□□ -2.8
VPS13AQ96RL7 snoU2-30.2-201ENST00000362805 70 ntBASIC-2.44□□□□□ -2.8
VPS13AQ96RL7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-2.44□□□□□ -2.8
VPS13AQ96RL7 RNU4-80P-201ENST00000363200 141 ntBASIC-2.44□□□□□ -2.8
VPS13AQ96RL7 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.44□□□□□ -2.8
VPS13AQ96RL7 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.44□□□□□ -2.8
VPS13AQ96RL7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-2.44□□□□□ -2.8
VPS13AQ96RL7 RNU6-90P-201ENST00000606352 106 ntBASIC-2.44□□□□□ -2.8
VPS13AQ96RL7 U6.114-201ENST00000636407 96 ntBASIC-2.44□□□□□ -2.8
VPS13AQ96RL7 SNRPGP10-201ENST00000432323 225 ntBASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 SNORD115-23-201ENST00000364461 82 ntBASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 RNU6-701P-201ENST00000384059 107 ntBASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 MIR891A-201ENST00000401237 79 ntBASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 AC111193.1-201ENST00000504097 155 ntBASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 RNU5F-2P-201ENST00000516066 82 ntBASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 RNU1-141P-201ENST00000364623 158 ntBASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 MTND1P37-201ENST00000636562 264 ntBASIC-2.45□□□□□ -2.8
VPS13AQ96RL7 SNORA33-201ENST00000363664 130 ntBASIC-2.46□□□□□ -2.8
VPS13AQ96RL7 BTF3L4P3-201ENST00000418879 476 ntBASIC-2.46□□□□□ -2.8
VPS13AQ96RL7 MTND2P38-201ENST00000522536 667 ntBASIC-2.46□□□□□ -2.8
VPS13AQ96RL7 CR383656.7-201ENST00000548164 174 ntBASIC-2.46□□□□□ -2.8
VPS13AQ96RL7 SNORA59B-202ENST00000578183 701 ntBASIC-2.46□□□□□ -2.8
VPS13AQ96RL7 snoU13.14-201ENST00000459372 104 ntBASIC-2.46□□□□□ -2.8
VPS13AQ96RL7 SNORD123-201ENST00000459473 70 ntBASIC-2.46□□□□□ -2.8
VPS13AQ96RL7 RNU6-168P-201ENST00000516189 101 ntBASIC-2.46□□□□□ -2.8
VPS13AQ96RL7 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.47□□□□□ -2.8
VPS13AQ96RL7 AL163152.1-201ENST00000642001 374 ntBASIC-2.47□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms