Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RNU1-131P-201ENST00000458943 161 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 TRBV12-1-201ENST00000479785 344 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 AC097462.1-201ENST00000514125 324 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 RNU7-172P-201ENST00000517125 64 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 AL137100.2-201ENST00000555786 315 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SNX18Q96RF0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 MIR6840-201ENST00000611937 71 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
SNX18Q96RF0 Y_RNA.802-201ENST00000614892 130 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SNX18Q96RF0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNX18Q96RF0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNX18Q96RF0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SNX18Q96RF0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SNX18Q96RF0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 RNU4-13P-201ENST00000364019 141 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 RNA5SP493-201ENST00000364115 91 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 snoU2_19.4-201ENST00000364329 80 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 Y_RNA.240-201ENST00000364469 95 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 RNU6-117P-201ENST00000365415 107 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 RNU6-969P-201ENST00000383900 105 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 SNORA6-201ENST00000384033 151 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 MIR626-201ENST00000385032 94 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 RNU6-381P-201ENST00000391259 108 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 SNORA36B-201ENST00000410438 131 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 AC010154.1-201ENST00000425857 269 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.2□□□□□ -2.06
SNX18Q96RF0 AC015720.1-201ENST00000565251 277 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 AL031274.2-201ENST00000599419 203 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 AP003357.1-201ENST00000604497 148 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.2□□□□□ -2.06
SNX18Q96RF0 U6.106-201ENST00000636360 105 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 AC245060.5-201ENST00000610778 3293 ntBASIC2.2□□□□□ -2.06
SNX18Q96RF0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNX18Q96RF0 MIR367-201ENST00000362299 68 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 Y_RNA.182-201ENST00000363880 111 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RNA5SP37-201ENST00000365420 130 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RNU6-1323P-201ENST00000384025 107 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RNU6-376P-201ENST00000384731 106 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RNU6-383P-201ENST00000410864 94 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 AL353689.1-201ENST00000438895 199 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RPL36AP21-201ENST00000490372 323 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RPL23AP54-201ENST00000495129 419 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 AC090255.1-201ENST00000495779 349 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX18Q96RF0 MRPS18CP4-201ENST00000535821 231 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 AC091544.4-201ENST00000555268 342 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 AC127455.1-201ENST00000565496 145 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX18Q96RF0 AC067747.1-201ENST00000608026 250 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 U6.73-201ENST00000619194 103 ntBASIC2.19□□□□□ -2.06
SNX18Q96RF0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX18Q96RF0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX18Q96RF0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNX18Q96RF0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNX18Q96RF0 AC131280.1-202ENST00000624067 4211 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 RNU6-23P-201ENST00000363283 107 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 RNU6-144P-201ENST00000383951 107 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 Y_RNA.464-201ENST00000384282 110 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 MIR29C-201ENST00000385231 88 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 MIR526A2-201ENST00000390198 65 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 AL162725.1-201ENST00000435405 301 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 RN7SL636P-201ENST00000497504 294 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 RNU7-116P-201ENST00000516940 62 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 MIR4724-201ENST00000579485 89 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 MIR6715A-201ENST00000615929 79 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
SNX18Q96RF0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
SNX18Q96RF0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNX18Q96RF0 SNORD114-30-201ENST00000364448 72 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 Y_RNA.412-201ENST00000384001 104 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 RNA5SP467-201ENST00000391274 118 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 AL359511.1-201ENST00000402970 211 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 EBAG9P1-201ENST00000418955 543 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 AC245047.8-201ENST00000456455 284 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 RPS29P21-201ENST00000496272 170 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 YWHAEP4-201ENST00000505390 198 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 SCARNA8-201ENST00000515924 131 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 RN7SKP164-201ENST00000516138 266 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 RNA5SP320-201ENST00000516263 124 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 RNU6-453P-201ENST00000516819 85 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 RNA5SP137-201ENST00000516833 135 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 RNU6-255P-201ENST00000516957 105 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.17□□□□□ -2.06
SNX18Q96RF0 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 AC073413.2-201ENST00000604332 360 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 AC104465.1-201ENST00000611365 139 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 MIR1291-201ENST00000627649 87 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 MIR338-201ENST00000636369 67 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.17□□□□□ -2.06
SNX18Q96RF0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms