Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MLLT10P1-201ENST00000418346 262 ntBASIC3.29□□□□□ -1.88
SYNGAP1Q96PV0 RNA5SP490-201ENST00000517141 136 ntBASIC3.29□□□□□ -1.88
SYNGAP1Q96PV0 SNORD53-201ENST00000579969 78 ntBASIC3.29□□□□□ -1.88
SYNGAP1Q96PV0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNGAP1Q96PV0 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
SYNGAP1Q96PV0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNGAP1Q96PV0 Y_RNA.203-201ENST00000364106 102 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 Y_RNA.563-201ENST00000384707 108 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 SNORA40.5-201ENST00000391061 128 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 MIR1253-201ENST00000408273 105 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 AL158823.1-201ENST00000418441 478 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 HMGN2P18-201ENST00000450680 270 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 AC010531.2-201ENST00000465012 153 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 RN7SKP43-201ENST00000516173 320 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 MIR2681-201ENST00000581814 105 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 MIR4438-201ENST00000585271 93 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 AC110079.1-202ENST00000635213 138 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 ZNF658B-202ENST00000615961 3375 ntBASIC3.28□□□□□ -1.88
SYNGAP1Q96PV0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 RNU6-1235P-201ENST00000384559 107 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 RNA5SP274-201ENST00000410484 108 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 RNU2-55P-201ENST00000411146 174 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 RNU6-498P-201ENST00000459468 107 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 CYCTP-201ENST00000504253 315 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 RNU7-172P-201ENST00000517125 64 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 MIR3117-201ENST00000584034 78 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 uc_338.4-201ENST00000616635 176 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 WWP1P1-201ENST00000466609 2769 ntBASIC3.27□□□□□ -1.89
SYNGAP1Q96PV0 Y_RNA.91-201ENST00000363042 107 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 RNU6-978P-201ENST00000364371 103 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 RNU6-484P-201ENST00000384016 107 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 AC009969.1-201ENST00000438726 172 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 SNORD59.2-201ENST00000516873 68 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 Y_RNA.712-201ENST00000517011 92 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 AC079600.2-201ENST00000550076 130 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 MIR3199-1-201ENST00000582434 88 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 JPX_2.1-201ENST00000614161 69 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 Pinc.1-201ENST00000616452 154 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 AC002064.3-201ENST00000623448 346 ntBASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SYNGAP1Q96PV0 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 Y_RNA.114-201ENST00000363265 113 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 RPL30P4-201ENST00000429309 333 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 RPS4XP11-201ENST00000446897 772 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 AC016925.1-201ENST00000458303 298 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 AC006483.1-201ENST00000487308 313 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 SNORA18.4-201ENST00000516440 124 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 Y_RNA.690-201ENST00000516603 95 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 Y_RNA.709-201ENST00000516952 92 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 AC011604.1-201ENST00000545978 196 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 AC131055.1-201ENST00000584626 316 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 AC006435.5-201ENST00000624486 112 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 MIR1248-201ENST00000629190 106 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.25□□□□□ -1.89
SYNGAP1Q96PV0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 SNORA14A-201ENST00000364773 135 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 Y_RNA.634-201ENST00000364811 113 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 MIR9-1-201ENST00000385198 89 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 SNORA3.2-201ENST00000408221 125 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 RNU2-32P-201ENST00000411193 191 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 AL161788.1-201ENST00000441805 169 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 AL158147.1-201ENST00000443970 75 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 SNORD109B-201ENST00000458961 67 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 SNORD109A-201ENST00000459128 67 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 RN7SKP282-201ENST00000516824 299 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 MIR3121-201ENST00000579680 77 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 AC105245.1-201ENST00000581934 244 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 AL021707.8-201ENST00000609428 183 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 U6.95-201ENST00000636931 70 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 MIR7515-201ENST00000637837 67 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 AC245060.5-201ENST00000610778 3293 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 MTND5P32-201ENST00000560711 1802 ntBASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SYNGAP1Q96PV0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 Y_RNA.120-201ENST00000363304 110 ntBASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 RNU6-1209P-201ENST00000363655 107 ntBASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 RNU6-117P-201ENST00000365415 107 ntBASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 RNU6-546P-201ENST00000383991 107 ntBASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 SNORA67.4-201ENST00000384688 142 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms