| MUS81 | Q96NY9 | AC011604.2-202 | ENST00000540229 | 2451 nt | APPRIS P5 TSL 2 BASIC | 1.42 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | FABP12-201 | ENST00000360464 | 551 nt | APPRIS P1 TSL 1 (best) BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | SNORD14.1-201 | ENST00000365609 | 90 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | Y_RNA.424-201 | ENST00000384063 | 103 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | Y_RNA.462-201 | ENST00000384268 | 102 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | RPL23AP36-201 | ENST00000413895 | 458 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | MTND1P14-201 | ENST00000427400 | 950 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | SUMO2P16-201 | ENST00000519475 | 264 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | AC040926.1-201 | ENST00000530195 | 238 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | PRR13P7-201 | ENST00000605538 | 430 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | AC007485.1-201 | ENST00000616755 | 206 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | AC005592.1-201 | ENST00000566527 | 1640 nt | BASIC | 1.4 | □□□□□ -2.18 | | |
| MUS81 | Q96NY9 | PTPN22-203 | ENST00000460620 | 1794 nt | TSL 1 (best) BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | SNORD42.2-201 | ENST00000365570 | 69 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.458-201 | ENST00000384240 | 102 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-136P-201 | ENST00000384663 | 107 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MIR660-201 | ENST00000385235 | 97 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MIR1304-201 | ENST00000408243 | 91 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-710P-201 | ENST00000410424 | 105 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU2-61P-201 | ENST00000411069 | 191 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MCFD2P1-201 | ENST00000417812 | 300 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RPL30P13-201 | ENST00000418873 | 348 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC108516.1-201 | ENST00000503666 | 257 nt | TSL 2 BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU7-110P-201 | ENST00000516891 | 62 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MIR4423-201 | ENST00000580922 | 80 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AL365434.2-201 | ENST00000607979 | 234 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MIR7974-201 | ENST00000615835 | 79 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | LRRD1-203 | ENST00000430130 | 2661 nt | APPRIS P1 TSL 5 BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.80-201 | ENST00000362996 | 102 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-457P-201 | ENST00000363999 | 107 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.331-201 | ENST00000365267 | 102 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.471-201 | ENST00000384312 | 102 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.485-201 | ENST00000384395 | 102 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MIR1302-11-201 | ENST00000408051 | 138 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MIR1302-9-201 | ENST00000408365 | 138 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MIR1302-10-201 | ENST00000408734 | 138 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-1199P-201 | ENST00000411249 | 104 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AL354751.2-201 | ENST00000415471 | 210 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RPS27P16-201 | ENST00000425758 | 201 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC024067.1-201 | ENST00000426199 | 223 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AL162725.1-201 | ENST00000435405 | 301 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AL049830.1-201 | ENST00000468034 | 425 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | SNORA25.10-201 | ENST00000515926 | 124 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNA5SP61-201 | ENST00000516453 | 100 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MIR1302-2-201 | ENST00000607096 | 138 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC011373.1-201 | ENST00000607270 | 237 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | CENPQ-201 | ENST00000335783 | 1733 nt | APPRIS P1 TSL 1 (best) BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AP000648.3-201 | ENST00000623539 | 4507 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.61-201 | ENST00000362835 | 102 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU4-76P-201 | ENST00000364509 | 141 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-21P-201 | ENST00000384710 | 107 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | SNORA12.1-201 | ENST00000390873 | 148 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | SNORA17.3-201 | ENST00000391159 | 129 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNA5SP511-201 | ENST00000410487 | 115 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.621-201 | ENST00000411065 | 96 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RPEP5-201 | ENST00000441137 | 268 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MTND4P19-201 | ENST00000446659 | 478 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-436P-201 | ENST00000516171 | 114 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC022616.4-201 | ENST00000522985 | 181 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC015720.1-201 | ENST00000565251 | 277 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | SNORD53B-201 | ENST00000577887 | 78 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | SLC25A46-204 | ENST00000504098 | 2345 nt | TSL 5 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | LINC00643-201 | ENST00000334389 | 3247 nt | TSL 2 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | TDRD15-202 | ENST00000622654 | 5805 nt | APPRIS P1 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.813-201 | ENST00000364639 | 102 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-424P-201 | ENST00000384367 | 105 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | MIR517C-201 | ENST00000385103 | 95 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.604-201 | ENST00000410574 | 102 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AL135790.2-201 | ENST00000437701 | 267 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC069023.1-201 | ENST00000442231 | 221 nt | TSL 3 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RPL30P7-201 | ENST00000479312 | 323 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | OR9P1P-201 | ENST00000496431 | 281 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNA5SP168-201 | ENST00000516642 | 112 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC100807.1-201 | ENST00000517640 | 552 nt | TSL 5 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC090124.1-201 | ENST00000525097 | 448 nt | TSL 3 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AP000942.3-201 | ENST00000603702 | 160 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AL078604.3-201 | ENST00000615580 | 211 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC091812.1-201 | ENST00000432235 | 1948 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-60P-201 | ENST00000364792 | 103 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.329-201 | ENST00000365209 | 107 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | SNORA63.7-201 | ENST00000365579 | 123 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | SNORD116-13-201 | ENST00000384408 | 92 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.535-201 | ENST00000384612 | 99 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.551-201 | ENST00000384661 | 102 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-308P-201 | ENST00000390957 | 107 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-855P-201 | ENST00000410395 | 104 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AL135923.1-201 | ENST00000413066 | 196 nt | TSL 3 BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | CALM2P4-201 | ENST00000430810 | 426 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | Y_RNA.631-201 | ENST00000459607 | 101 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RPL39P38-201 | ENST00000467018 | 153 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-988P-201 | ENST00000519081 | 107 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | ZGRF1-203 | ENST00000445203 | 6529 nt | APPRIS P1 TSL 5 BASIC | 1.35 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-199P-201 | ENST00000362954 | 107 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | SNORD63-201 | ENST00000384262 | 68 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | RNU6-1105P-201 | ENST00000384774 | 107 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC108667.1-201 | ENST00000428618 | 249 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| MUS81 | Q96NY9 | AC092473.1-201 | ENST00000441098 | 221 nt | BASIC | 1.35 | □□□□□ -2.19 | | |