Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 UBE2V1P7-201ENST00000446395 340 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 OR9P1P-201ENST00000496431 281 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 RNU6-1146P-201ENST00000516282 102 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 RNU6-1337P-201ENST00000516525 95 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 AC144568.1-201ENST00000520139 137 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.93□□□□□ -2.26
LINC00477Q96M19 AC024995.1-201ENST00000523014 93 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 AC090821.2-201ENST00000523552 176 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 MIR4709-201ENST00000577272 72 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 MIR4778-201ENST00000577635 80 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 AC106754.2-201ENST00000623006 233 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 Y_RNA.143-201ENST00000363520 106 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNU6-806P-201ENST00000365147 105 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNU6-1175P-201ENST00000365200 107 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 Y_RNA.329-201ENST00000365209 107 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 SNORA40.6-201ENST00000391153 128 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 U8.16-201ENST00000391279 133 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 MIR873-201ENST00000401120 77 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 MRPL42P3-201ENST00000401492 326 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNU4-62P-201ENST00000410125 130 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNU2-54P-201ENST00000410299 190 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNU6-121P-201ENST00000410525 99 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNA5SP475-201ENST00000410568 110 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.92□□□□□ -2.26
LINC00477Q96M19 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.92□□□□□ -2.26
LINC00477Q96M19 Z98949.2-201ENST00000440996 144 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 DYNLT3P2-201ENST00000442517 295 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RPS4XP11-201ENST00000446897 772 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 FCF1P4-201ENST00000448326 183 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 AC092991.1-201ENST00000477176 376 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 AC004223.1-201ENST00000479840 271 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNU6-397P-201ENST00000516226 104 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNU6-155P-201ENST00000516347 100 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNU6-165P-201ENST00000517170 99 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 RN7SKP295-201ENST00000517264 153 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 DEFB117-201ENST00000602356 141 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 AC022441.3-201ENST00000605737 136 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 AC004832.4-201ENST00000608952 331 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 AL512598.1-201ENST00000610158 273 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.92□□□□□ -2.26
LINC00477Q96M19 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
LINC00477Q96M19 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
LINC00477Q96M19 ICE2P2-201ENST00000483823 2787 ntBASIC0.92□□□□□ -2.26
LINC00477Q96M19 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.92□□□□□ -2.26
LINC00477Q96M19 RNU6-1266P-201ENST00000362794 105 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 Y_RNA.140-201ENST00000363474 103 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 RNU4-41P-201ENST00000364426 143 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 RNU1-115P-201ENST00000365329 160 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 SNORA22B-201ENST00000383876 138 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 RNU6-1080P-201ENST00000383982 107 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 MIR628-201ENST00000385229 95 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 MT-TD-201ENST00000387419 68 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 RNU2-61P-201ENST00000411069 191 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AL354751.2-201ENST00000415471 210 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 MTCO3P19-201ENST00000415864 321 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AC236972.2-201ENST00000434979 310 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.91□□□□□ -2.26
LINC00477Q96M19 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.91□□□□□ -2.26
LINC00477Q96M19 HSPE1P13-201ENST00000451143 297 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AC079140.2-201ENST00000506193 142 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 RNU6-976P-201ENST00000516086 111 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AC040926.1-201ENST00000530195 238 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.91□□□□□ -2.26
LINC00477Q96M19 AC020661.2-201ENST00000560114 134 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.91□□□□□ -2.26
LINC00477Q96M19 MIR3660-201ENST00000584845 100 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AC005176.2-201ENST00000596933 147 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 RAC1P9-201ENST00000604990 392 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AC133104.2-201ENST00000615272 193 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AL160413.1-201ENST00000622780 310 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 AC127459.3-201ENST00000624328 466 ntBASIC0.91□□□□□ -2.26
LINC00477Q96M19 RNU5F-3P-201ENST00000363767 117 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 RNU6-1048P-201ENST00000364054 107 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 SNORA72.2-201ENST00000365028 127 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 RNU6-376P-201ENST00000384731 106 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 MIR513A1-201ENST00000385138 129 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.9□□□□□ -2.27
LINC00477Q96M19 RNU2-14P-201ENST00000411053 191 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 COX6CP10-201ENST00000416832 224 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.9□□□□□ -2.27
LINC00477Q96M19 RPS29P29-201ENST00000456396 171 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 OR2A41P-201ENST00000473586 105 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 AC098869.1-201ENST00000481627 292 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 RPL36AP21-201ENST00000490372 323 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 AC108210.2-201ENST00000503681 201 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 RNU6-911P-201ENST00000516523 104 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 RNA5SP168-201ENST00000516642 112 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 RNA5SP481-201ENST00000516814 122 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 RNU6-1096P-201ENST00000517089 102 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 MIR2355-201ENST00000517199 87 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 CYCSP23-201ENST00000519781 313 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.9□□□□□ -2.27
LINC00477Q96M19 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 AL078604.3-201ENST00000615580 211 ntBASIC0.9□□□□□ -2.27
LINC00477Q96M19 RNA5SP259-201ENST00000365541 109 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 Y_RNA.445-201ENST00000384168 102 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 MIR515-2-201ENST00000384883 83 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 MIR515-1-201ENST00000384884 83 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms