Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 Y_RNA.120-201ENST00000363304 110 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 Y_RNA.486-201ENST00000384398 107 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 AC023449.1-201ENST00000454464 154 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 NDUFA4P2-201ENST00000489989 244 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 RNU1-143P-201ENST00000516296 146 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 RNU6-667P-201ENST00000517186 102 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 AC068657.1-201ENST00000520807 306 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 GTF3AP2-201ENST00000557014 266 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 U1.23-201ENST00000610293 146 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 RNU1-68P-201ENST00000615382 146 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 U1.39-201ENST00000621562 146 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 MIR622-201ENST00000638396 96 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 AL035425.3-201ENST00000564206 4996 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 RNU6-153P-201ENST00000364422 104 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 RNA5SP126-201ENST00000365092 109 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 RNU6-1138P-201ENST00000365359 106 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 RNU2-63P-201ENST00000410792 194 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 MLLT10P1-201ENST00000418346 262 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 OR9P1P-201ENST00000496431 281 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 RNU6-772P-201ENST00000516042 105 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 RPPH1-2P-201ENST00000516688 293 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 Y_RNA.757-201ENST00000578934 114 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 MIR4672-201ENST00000583126 81 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 AC091178.2-201ENST00000584401 117 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 AC131055.1-201ENST00000584626 316 ntBASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.48□□□□□ -1.85
VTI1AQ96AJ9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 MIR22-201ENST00000362190 85 ntBASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 Y_RNA.66-201ENST00000362862 102 ntBASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 RNU6-508P-201ENST00000363231 103 ntBASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 MIR520G-201ENST00000385064 90 ntBASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 RNA5SP467-201ENST00000391274 118 ntBASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 RNU6-1064P-201ENST00000410626 104 ntBASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 Y_RNA.621-201ENST00000411065 96 ntBASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 Y_RNA.692-201ENST00000516627 105 ntBASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 JPX_2.1-201ENST00000614161 69 ntBASIC3.47□□□□□ -1.85
VTI1AQ96AJ9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
VTI1AQ96AJ9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
VTI1AQ96AJ9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 RNU6-476P-201ENST00000384726 107 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 SNORD67-201ENST00000390833 111 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 SNORA40.5-201ENST00000391061 128 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 AC003685.2-201ENST00000422795 395 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 AL158147.1-201ENST00000443970 75 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 RPL39P40-201ENST00000445481 146 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 RNA5SP356-201ENST00000515972 94 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 RNU6-1041P-201ENST00000516254 102 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 RNU7-99P-201ENST00000516271 62 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 RNA5SP367-201ENST00000516557 118 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 RNU6-1291P-201ENST00000516591 104 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 AC245166.1-201ENST00000521012 253 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 AC007751.1-201ENST00000529260 376 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 MIR3121-201ENST00000579680 77 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 ELOCP29-201ENST00000588193 334 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 MIR6129-201ENST00000616087 109 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 MIR3914-2-201ENST00000637339 95 ntBASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VTI1AQ96AJ9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 Y_RNA.114-201ENST00000363265 113 ntBASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 RNA5SP125-201ENST00000364843 120 ntBASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 MIR561-201ENST00000385216 97 ntBASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 RN7SKP284-201ENST00000411002 343 ntBASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 AC091826.1-201ENST00000514065 313 ntBASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 RNU6-1146P-201ENST00000516282 102 ntBASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 AC007229.1-201ENST00000590455 412 ntBASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 MIR338-201ENST00000636369 67 ntBASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 U6.108-201ENST00000637764 58 ntBASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTI1AQ96AJ9 AL136360.1-201ENST00000503377 1900 ntBASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 SNORA33-201ENST00000363664 130 ntBASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 SNORD114-6-201ENST00000364393 72 ntBASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 RNU6-1144P-201ENST00000384247 104 ntBASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 SNORA26-201ENST00000391286 122 ntBASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 AC233266.1-201ENST00000454518 96 ntBASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 MIR4662B-201ENST00000579498 81 ntBASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 AC242852.1-201ENST00000612151 96 ntBASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 AC244015.1-201ENST00000622301 99 ntBASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.44□□□□□ -1.86
VTI1AQ96AJ9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 SNORA63.4-201ENST00000362763 126 ntBASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 Y_RNA.253-201ENST00000364562 112 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms