| CLUAP1 | Q96AJ1 | RNU6-597P-201 | ENST00000365620 | 102 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | RNU6-484P-201 | ENST00000384016 | 107 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | SNORA44-201 | ENST00000384584 | 132 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | SNORD37.2-201 | ENST00000391075 | 66 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | RNA5SP492-201 | ENST00000411330 | 114 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | EEF1A1P41-201 | ENST00000414667 | 207 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AL355388.1-201 | ENST00000415726 | 401 nt | TSL 2 BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AL139132.1-201 | ENST00000431587 | 344 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC020743.3-201 | ENST00000440351 | 360 nt | TSL 3 BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | S100A11P2-201 | ENST00000467589 | 312 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | OR9P1P-201 | ENST00000496431 | 281 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | MIR6844-201 | ENST00000637122 | 62 nt | BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | GPR22-201 | ENST00000304402 | 2942 nt | APPRIS P1 TSL 1 (best) BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | PIK3C2G-201 | ENST00000266497 | 4764 nt | APPRIS P1 TSL 1 (best) BASIC | 3.63 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC233266.1-201 | ENST00000454518 | 96 nt | BASIC | 3.62 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | RNA5SP76-201 | ENST00000516277 | 87 nt | BASIC | 3.62 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC242852.1-201 | ENST00000612151 | 96 nt | BASIC | 3.62 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC244015.1-201 | ENST00000622301 | 99 nt | BASIC | 3.62 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | SLC39A10-201 | ENST00000359634 | 5322 nt | APPRIS P1 TSL 1 (best) BASIC | 3.62 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | VPS54-202 | ENST00000354504 | 3594 nt | TSL 1 (best) BASIC | 3.62 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | CHD9-218 | ENST00000566029 | 13110 nt | APPRIS P1 TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | ARHGAP15-202 | ENST00000409869 | 2968 nt | TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | RNU6-862P-201 | ENST00000362804 | 105 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | LINC00393-201 | ENST00000443621 | 282 nt | TSL 3 BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | SNORA31.26-201 | ENST00000517250 | 137 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC112693.2-201 | ENST00000556538 | 232 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AL031274.2-201 | ENST00000599419 | 203 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC097639.2-201 | ENST00000603159 | 172 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | HNRNPDLP4-201 | ENST00000605144 | 301 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC091895.1-201 | ENST00000624494 | 256 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC108206.1-201 | ENST00000570186 | 4159 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | MIR569-201 | ENST00000385228 | 96 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | SNORA75.5-201 | ENST00000391291 | 81 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | KRTAP25-1-201 | ENST00000416044 | 370 nt | APPRIS P1 BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC069257.2-201 | ENST00000441819 | 155 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | DIP2A-IT1-201 | ENST00000442434 | 428 nt | TSL 2 BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC003982.1-202 | ENST00000469928 | 248 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | ST7-OT4_1.1-201 | ENST00000615322 | 200 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | IKZF2-213 | ENST00000457361 | 9350 nt | TSL 5 BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | FOXP2-211 | ENST00000408937 | 6443 nt | TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | NBPF20-202 | ENST00000392971 | 18450 nt | APPRIS P2 TSL 5 BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC096644.4-201 | ENST00000563417 | 2912 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | CENPE-201 | ENST00000265148 | 8612 nt | APPRIS P1 TSL 2 BASIC | 3.6 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.267-201 | ENST00000364679 | 109 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | RNU6-131P-201 | ENST00000391144 | 107 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | MIR548I2-201 | ENST00000408348 | 149 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | RNU2-70P-201 | ENST00000410718 | 179 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC245047.4-201 | ENST00000433189 | 144 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC091133.1-201 | ENST00000435491 | 483 nt | TSL 3 BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AL163195.1-201 | ENST00000496941 | 348 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | RNU6-1291P-201 | ENST00000516591 | 104 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | SCARNA13-201 | ENST00000516672 | 275 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | AC107016.2-201 | ENST00000547968 | 190 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | GNG2-205 | ENST00000554736 | 569 nt | APPRIS P1 TSL 4 BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | MIR4506-201 | ENST00000584693 | 77 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CLUAP1 | Q96AJ1 | OXR1-215 | ENST00000531443 | 3599 nt | TSL 5 BASIC | 3.59 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | USP15-203 | ENST00000353364 | 14950 nt | APPRIS P3 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.253-201 | ENST00000364562 | 112 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | SNORD88.1-201 | ENST00000408684 | 91 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RN7SKP123-201 | ENST00000410732 | 291 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AL606753.1-201 | ENST00000427435 | 87 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | SNRPGP10-201 | ENST00000432323 | 225 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNU7-149P-201 | ENST00000516739 | 59 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AC021785.1-201 | ENST00000520780 | 453 nt | TSL 3 BASIC | 3.58 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | DMD-203 | ENST00000357033 | 13956 nt | APPRIS P3 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | SLCO1B3-202 | ENST00000381545 | 2805 nt | APPRIS P1 TSL 2 BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNF219-AS1-214 | ENST00000607862 | 6001 nt | TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | CEP44-203 | ENST00000426172 | 3037 nt | TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNU6-768P-201 | ENST00000384683 | 107 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNA5SP465-201 | ENST00000391195 | 109 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AL049830.1-201 | ENST00000468034 | 425 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNU6-426P-201 | ENST00000516464 | 97 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNU7-28P-201 | ENST00000516759 | 62 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AC007598.1-202 | ENST00000561528 | 435 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AC069114.2-201 | ENST00000604699 | 304 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | MALAT1-207 | ENST00000613376 | 132 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | Pinc.1-201 | ENST00000616452 | 154 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | MIER3-203 | ENST00000381213 | 5198 nt | APPRIS P3 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | SNORA25.7-201 | ENST00000364375 | 127 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | SNORA40-201 | ENST00000388090 | 126 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RAB6C-AS1-202 | ENST00000433431 | 123 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AL135938.1-201 | ENST00000443141 | 297 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RN7SL297P-201 | ENST00000483161 | 293 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNA5SP385-201 | ENST00000515947 | 110 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNU2-56P-201 | ENST00000516826 | 190 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AC079600.2-201 | ENST00000550076 | 130 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | MIR3658-201 | ENST00000636291 | 56 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | MCF2-208 | ENST00000519895 | 3346 nt | APPRIS ALT2 TSL 2 BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | GABRG2-215 | ENST00000639213 | 9960 nt | TSL 1 (best) BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AC010332.2-201 | ENST00000613083 | 1904 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | ZMYM1-210 | ENST00000611874 | 4466 nt | APPRIS P1 TSL 2 BASIC | 3.56 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | SNORD115-3-201 | ENST00000363100 | 82 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNU6-1019P-201 | ENST00000364424 | 107 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNU6-1117P-201 | ENST00000384525 | 104 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNU6-851P-201 | ENST00000384565 | 107 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | RNA5SP344-201 | ENST00000411081 | 104 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AC099677.2-201 | ENST00000436385 | 175 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AC107083.1-201 | ENST00000439643 | 279 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | MIR3605-201 | ENST00000583214 | 100 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| CLUAP1 | Q96AJ1 | AC135178.3-204 | ENST00000585181 | 451 nt | TSL 2 BASIC | 3.55 | □□□□□ -1.84 | | |