Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RNA5SP399-201ENST00000364003 117 ntBASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 RNU6-1229P-201ENST00000364295 107 ntBASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 RNU4-69P-201ENST00000410677 143 ntBASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 AC087499.4-201ENST00000448505 178 ntBASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 MIR2114-201ENST00000516645 80 ntBASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 RNU6-586P-201ENST00000517265 104 ntBASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.67□□□□□ -1.82
SNIP1Q8TAD8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 RNU6-1084P-201ENST00000362498 107 ntBASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 SNORA1B-201ENST00000362535 133 ntBASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 SNORD68-201ENST00000363214 84 ntBASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 Y_RNA.299-201ENST00000364973 94 ntBASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 Y_RNA.430-201ENST00000384081 110 ntBASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 AL627390.1-201ENST00000396055 340 ntBASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 ATP5A1P2-201ENST00000412323 255 ntBASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 RN7SL271P-201ENST00000487601 295 ntBASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 uc_338.32-201ENST00000615087 172 ntBASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNIP1Q8TAD8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SNIP1Q8TAD8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
SNIP1Q8TAD8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SNIP1Q8TAD8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SNIP1Q8TAD8 RNU1-89P-201ENST00000384592 164 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 RNA5SP467-201ENST00000391274 118 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 MIR1251-201ENST00000408552 70 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 AL035398.1-201ENST00000430869 322 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 BX510359.1-201ENST00000456973 237 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 RNA5SP112-201ENST00000515937 99 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 SNORA31.4-201ENST00000516049 129 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 RNA5SP164-201ENST00000516533 110 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 MIR4712-201ENST00000583750 82 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 AC096720.1-201ENST00000604441 183 ntBASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNIP1Q8TAD8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 RNU6-616P-201ENST00000384353 107 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 MIR3074-201ENST00000384885 81 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 AC107083.1-201ENST00000439643 279 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 HMGN2P16-201ENST00000456802 261 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 SNORD105B-201ENST00000458770 79 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 MIR4439-201ENST00000583746 80 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 AF117829.1-206ENST00000621883 3802 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 AC021613.1-201ENST00000623880 111 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 AL512310.12-203ENST00000640543 90 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 ZNF962P-201ENST00000443465 3140 ntBASIC3.64□□□□□ -1.83
SNIP1Q8TAD8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 snoU2-30.2-201ENST00000362805 70 ntBASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 RNA5SP51-201ENST00000364750 119 ntBASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 snoU2-30.1-201ENST00000365012 70 ntBASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 POLR2J4-204ENST00000418424 324 ntBASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 AC145423.2-201ENST00000610631 239 ntBASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNIP1Q8TAD8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 RNA5SP322-201ENST00000363617 119 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 Y_RNA.609-201ENST00000410669 89 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 RNA5SP306-201ENST00000411087 107 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 AC123900.1-201ENST00000420390 96 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 AC115115.1-201ENST00000449927 248 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 AP002004.2-201ENST00000531656 154 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 MIR4762-201ENST00000585261 75 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 U4atac.1-201ENST00000618345 95 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 U6.108-201ENST00000637764 58 ntBASIC3.62□□□□□ -1.83
SNIP1Q8TAD8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SNIP1Q8TAD8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNIP1Q8TAD8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNIP1Q8TAD8 RNA5SP50-201ENST00000363731 107 ntBASIC3.61□□□□□ -1.83
SNIP1Q8TAD8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SNIP1Q8TAD8 SNORA48.2-201ENST00000390926 124 ntBASIC3.61□□□□□ -1.83
SNIP1Q8TAD8 RN7SKP167-201ENST00000411047 285 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms