Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU6-126P-201ENST00000516685 103 ntBASIC2.27□□□□□ -2.05
CLRN3Q8NCR9 uc_338.4-201ENST00000616635 176 ntBASIC2.27□□□□□ -2.05
CLRN3Q8NCR9 U6.106-201ENST00000636360 105 ntBASIC2.27□□□□□ -2.05
CLRN3Q8NCR9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.27□□□□□ -2.05
CLRN3Q8NCR9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLRN3Q8NCR9 AL035425.3-201ENST00000564206 4996 ntBASIC2.27□□□□□ -2.05
CLRN3Q8NCR9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 AC073325.2-201ENST00000339545 159 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 RNU6-275P-201ENST00000364910 107 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 RNU6-728P-201ENST00000365375 104 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 MIR134-201ENST00000385258 73 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 RNU6-578P-201ENST00000390980 103 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 AL606845.1-201ENST00000404881 255 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 snoU13.27-201ENST00000459278 104 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 SCARNA8-201ENST00000515924 131 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 SNORA31.10-201ENST00000516482 106 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 RNU6-861P-201ENST00000516745 106 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 AC022559.1-201ENST00000520905 205 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 MRPS18CP4-201ENST00000535821 231 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 AC121758.2-201ENST00000553271 193 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 AC034105.4-201ENST00000568304 277 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 MIR4709-201ENST00000577272 72 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 MIR4287-201ENST00000579398 78 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 MIR4762-201ENST00000585261 75 ntBASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
CLRN3Q8NCR9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 RNA5SP276-201ENST00000362580 94 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 SNORD68-201ENST00000363214 84 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 RNU6-682P-201ENST00000363843 106 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 Y_RNA.240-201ENST00000364469 95 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 U8.5-201ENST00000364528 136 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 RNU6-312P-201ENST00000364629 107 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 MIR7-3-201ENST00000384898 110 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 SNORD17-201ENST00000390930 237 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 Y_RNA.587-201ENST00000391210 103 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 AC009310.1-201ENST00000414414 451 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 RPL30P13-201ENST00000418873 348 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 FTH1P12-201ENST00000432137 551 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 HSPE1P9-201ENST00000440046 311 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 RNU7-34P-201ENST00000459394 64 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 RNU6-453P-201ENST00000516819 85 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 MIR4662B-201ENST00000579498 81 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 AL049861.1-201ENST00000603130 150 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 AC039056.2-201ENST00000622261 511 ntBASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLRN3Q8NCR9 Y_RNA.23-201ENST00000362496 106 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 RNU1-33P-201ENST00000364249 162 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 RNU6-209P-201ENST00000384118 107 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 MIR522-201ENST00000385071 87 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 MT-TR-201ENST00000387439 65 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 RNU2-55P-201ENST00000411146 174 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 MLLT10P1-201ENST00000418346 262 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 AC025518.1-201ENST00000479856 347 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 RNU6-1219P-201ENST00000516143 112 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 SNORA31.17-201ENST00000516953 127 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 MIR3158-1-201ENST00000583596 81 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 AC108706.1-201ENST00000611053 297 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 AC091953.5-201ENST00000622919 233 ntBASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLRN3Q8NCR9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 SNORA4.2-201ENST00000365313 147 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 Y_RNA.412-201ENST00000384001 104 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 RNU6-886P-201ENST00000384319 105 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 MT-TT-201ENST00000387460 66 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 RNU6-360P-201ENST00000390944 104 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 RN7SL293P-201ENST00000481765 281 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 OR9P1P-201ENST00000496431 281 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 SNORD77.4-201ENST00000516158 81 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 AC109810.1-201ENST00000534066 224 ntBASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLRN3Q8NCR9 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 RNU4-35P-201ENST00000362588 141 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 RNU6-1138P-201ENST00000365359 106 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 SNORD67-201ENST00000390833 111 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 SNORA79-201ENST00000408376 140 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 AC244636.1-201ENST00000421152 228 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 SNORA84-201ENST00000459229 133 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 AC003982.1-202ENST00000469928 248 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 AC005840.1-201ENST00000498412 377 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 SNORA67.7-201ENST00000516664 135 ntBASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.22□□□□□ -2.05
CLRN3Q8NCR9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms