Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AC073349.3-201ENST00000617616 186 ntBASIC1.37□□□□□ -2.19
CCDC63Q8NA47 AL513423.1-201ENST00000621695 132 ntBASIC1.37□□□□□ -2.19
CCDC63Q8NA47 AC005592.1-201ENST00000566527 1640 ntBASIC1.37□□□□□ -2.19
CCDC63Q8NA47 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC63Q8NA47 RNU6-324P-201ENST00000363957 106 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 RNU6-60P-201ENST00000364792 103 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 Y_RNA.445-201ENST00000384168 102 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 Y_RNA.460-201ENST00000384255 102 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 MIR520G-201ENST00000385064 90 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 RNU11-5P-201ENST00000391216 129 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 SNORA26.9-201ENST00000391322 122 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 CALM2P4-201ENST00000430810 426 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC63Q8NA47 AC010655.3-201ENST00000478818 450 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 RNU2-56P-201ENST00000516826 190 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 AP002004.2-201ENST00000531656 154 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 AL162424.1-201ENST00000602325 221 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 AC040896.1-201ENST00000613819 479 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 AL121890.5-201ENST00000620848 304 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 AC090574.1-201ENST00000623186 233 ntBASIC1.36□□□□□ -2.19
CCDC63Q8NA47 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC63Q8NA47 Y_RNA.138-201ENST00000363462 102 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 Y_RNA.329-201ENST00000365209 107 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 RNA5SP259-201ENST00000365541 109 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 MIR562-201ENST00000384894 95 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 MIR660-201ENST00000385235 97 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 RPS4XP11-201ENST00000446897 772 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 AC005042.3-201ENST00000453230 174 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 AL163540.1-201ENST00000485382 386 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 RNA5SP168-201ENST00000516642 112 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 MIR3683-201ENST00000580847 82 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 SNORA28-201ENST00000606769 126 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 AC004832.4-201ENST00000608952 331 ntBASIC1.35□□□□□ -2.19
CCDC63Q8NA47 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CCDC63Q8NA47 MIRLET7C-201ENST00000362160 84 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 RNU4-13P-201ENST00000364019 141 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 RNU4-50P-201ENST00000364361 141 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 Y_RNA.265-201ENST00000364677 108 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 SNORD14.1-201ENST00000365609 90 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 Y_RNA.471-201ENST00000384312 102 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 RNU6-937P-201ENST00000384325 106 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 RNU6-424P-201ENST00000384367 105 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 Y_RNA.526-201ENST00000384572 110 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 U8.16-201ENST00000391279 133 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 OOSP1P1-201ENST00000423265 274 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 Z98949.2-201ENST00000440996 144 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 U8.20-201ENST00000459445 131 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC63Q8NA47 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 SNORD3E-202ENST00000627253 216 ntBASIC1.34□□□□□ -2.19
CCDC63Q8NA47 Y_RNA.28-201ENST00000362554 111 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 Y_RNA.143-201ENST00000363520 106 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 RNU4-41P-201ENST00000364426 143 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 RNA5SP126-201ENST00000365092 109 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 Y_RNA.439-201ENST00000384119 94 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 SNORD63-201ENST00000384262 68 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 Y_RNA.551-201ENST00000384661 102 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AC233266.1-201ENST00000454518 96 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 SNORD13-201ENST00000459299 104 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 Y_RNA.631-201ENST00000459607 101 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AC092991.1-201ENST00000477176 376 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 RPL30P7-201ENST00000479312 323 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.33□□□□□ -2.2
CCDC63Q8NA47 SNORA25.10-201ENST00000515926 124 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 RN7SKP179-201ENST00000516126 217 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AL358944.1-201ENST00000528537 144 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AC136932.1-201ENST00000574771 208 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AC104695.3-201ENST00000604052 296 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AC242852.1-201ENST00000612151 96 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AL078604.3-201ENST00000615580 211 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 AC244015.1-201ENST00000622301 99 ntBASIC1.33□□□□□ -2.2
CCDC63Q8NA47 RNU6-797P-201ENST00000363101 109 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 Y_RNA.331-201ENST00000365267 102 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 RNA5SP482-201ENST00000391269 118 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 RNU4-30P-201ENST00000410245 143 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 AL049830.1-201ENST00000468034 425 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 RNU1-41P-201ENST00000516161 162 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 RNU1-48P-201ENST00000516400 162 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 RNU7-28P-201ENST00000516759 62 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC63Q8NA47 MIR4778-201ENST00000577635 80 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 DEFB117-201ENST00000602356 141 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 AL645939.4-201ENST00000604495 135 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 AC011373.1-201ENST00000607270 237 ntBASIC1.32□□□□□ -2.2
CCDC63Q8NA47 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CCDC63Q8NA47 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC63Q8NA47 RNU6-1080P-201ENST00000383982 107 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 RNU6-823P-201ENST00000391042 103 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 AL390729.2-201ENST00000416137 156 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 CYCSP49-201ENST00000420810 319 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 SNX2P2-201ENST00000424553 323 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 AL135790.2-201ENST00000437701 267 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 RPS20P10-201ENST00000451209 253 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 RPL23AP94-201ENST00000512518 302 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 RNU7-110P-201ENST00000516891 62 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 RNU1-92P-201ENST00000517017 135 ntBASIC1.31□□□□□ -2.2
CCDC63Q8NA47 AL512310.8-201ENST00000550183 120 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms