Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MIR489-201ENST00000384923 84 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 MIR136-201ENST00000385207 82 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 MIR1827-201ENST00000408549 66 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 MRPS18CP6-201ENST00000423587 223 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 AF235103.2-201ENST00000525753 346 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 MIR4764-201ENST00000580680 88 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 RNU6-94P-201ENST00000607728 107 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 AL357075.2-201ENST00000614906 189 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 PVT1_3.1-201ENST00000620853 95 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 RNU6-451P-201ENST00000362921 107 ntBASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 RNY3P3-201ENST00000363816 102 ntBASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 RNU6-306P-201ENST00000384617 107 ntBASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 RNU6-994P-201ENST00000410507 111 ntBASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 RNU2-66P-201ENST00000410650 161 ntBASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 AC018448.1-201ENST00000552843 316 ntBASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 AC011195.1-201ENST00000578177 177 ntBASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TRAM1L1Q8N609 MTND5P16-201ENST00000460269 1703 ntBASIC0.33□□□□□ -2.36
TRAM1L1Q8N609 SNORD105-201ENST00000386910 85 ntBASIC0.33□□□□□ -2.36
TRAM1L1Q8N609 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAM1L1Q8N609 ELOCP24-201ENST00000456370 334 ntBASIC0.33□□□□□ -2.36
TRAM1L1Q8N609 MIR3611-201ENST00000584484 83 ntBASIC0.33□□□□□ -2.36
TRAM1L1Q8N609 RN7SKP299-201ENST00000606679 301 ntBASIC0.33□□□□□ -2.36
TRAM1L1Q8N609 AL591926.4-201ENST00000616895 298 ntBASIC0.33□□□□□ -2.36
TRAM1L1Q8N609 RNU6-454P-201ENST00000364292 107 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 Y_RNA.243-201ENST00000364481 109 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 SNORD113.3-201ENST00000364630 78 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 RNU6-483P-201ENST00000384088 108 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 MIR516B2-201ENST00000385190 85 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 AL354751.2-201ENST00000415471 210 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 MTND1P4-201ENST00000435196 415 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 AL392103.1-201ENST00000447000 198 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 MIR5701-3-201ENST00000578890 82 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 MIR5701-1-201ENST00000585138 82 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 AF250324.2-201ENST00000608299 610 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 MIR5701-2-201ENST00000615634 82 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 MIR3674-201ENST00000636576 68 ntBASIC0.32□□□□□ -2.36
TRAM1L1Q8N609 Y_RNA.498-201ENST00000384460 102 ntBASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 RNU6-177P-201ENST00000411257 104 ntBASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 UBE2V1P7-201ENST00000446395 340 ntBASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 AC245008.1-201ENST00000608123 476 ntBASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 AC063944.3-201ENST00000609969 533 ntBASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 MIR6516-201ENST00000630554 81 ntBASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAM1L1Q8N609 Y_RNA.364-201ENST00000365532 101 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 MIR216A-201ENST00000385063 110 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 MIR140-201ENST00000385282 100 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 RNU6-780P-201ENST00000391030 104 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 MIR190B-201ENST00000401119 79 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 RNA5SP222-201ENST00000411039 105 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 DLGAP5P1-201ENST00000430307 464 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 RNU6-625P-201ENST00000459412 107 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 RNU6-63P-201ENST00000516690 95 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 AC134026.1-201ENST00000623249 2239 ntBASIC0.3□□□□□ -2.36
TRAM1L1Q8N609 SNORA36.2-201ENST00000384004 127 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 RNU6-342P-201ENST00000384521 104 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 RNU6-136P-201ENST00000384663 107 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 RNA5SP475-201ENST00000410568 110 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 HMGN2P32-201ENST00000444648 269 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 SNORD5.1-201ENST00000458800 75 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 AC010486.3-201ENST00000511602 785 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 Y_RNA.704-201ENST00000516851 102 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 SNORA18.7-201ENST00000516910 131 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 Z99129.1-201ENST00000612510 255 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 AC007742.2-201ENST00000618226 398 ntBASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAM1L1Q8N609 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 RNU6-842P-201ENST00000384269 107 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 RNU6-332P-201ENST00000391193 108 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 MIR1302-7-201ENST00000408841 72 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 RNU6-613P-201ENST00000410412 108 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 RNA5SP511-201ENST00000410487 115 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 RNU6-1304P-201ENST00000411374 106 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 MTCO2P12-201ENST00000427426 682 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 SNORD123-201ENST00000459473 70 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 RNU6-864P-201ENST00000516256 108 ntBASIC0.28□□□□□ -2.36
TRAM1L1Q8N609 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms