Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 RNU1-96P-201ENST00000364163 162 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 MIR627-201ENST00000384979 97 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 RNU4-43P-201ENST00000410628 137 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 RNA5SP21-201ENST00000410917 96 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 EDDM3CP-201ENST00000415977 425 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 MTND4LP9-201ENST00000427694 174 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 AC104332.2-201ENST00000429959 156 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 RPS27P1-201ENST00000450552 247 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 UBE2DNL-203ENST00000474922 222 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 MIR3616-201ENST00000584070 92 ntBASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM48Q8IWZ4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 Y_RNA.393-201ENST00000383936 102 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 Y_RNA.420-201ENST00000384043 110 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 RNU6-22P-201ENST00000384355 107 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 Y_RNA.542-201ENST00000384641 111 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 MIR9-1-201ENST00000385198 89 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 SNORA40-201ENST00000388090 126 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 RNU6-460P-201ENST00000391158 108 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 SRIP3-201ENST00000413200 219 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 RPS29P6-201ENST00000438196 145 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 AC003982.1-202ENST00000469928 248 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 SNORA9.3-201ENST00000516383 129 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 RNU6-971P-201ENST00000516920 106 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 RNU7-128P-201ENST00000517247 62 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 AL365222.1-201ENST00000614661 98 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 MIR338-201ENST00000636369 67 ntBASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM48Q8IWZ4 AC062016.1-201ENST00000355719 319 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 SNORD115-3-201ENST00000363100 82 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 RNU1-112P-201ENST00000364401 164 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-1081P-201ENST00000384537 107 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 SNORA79-201ENST00000408376 140 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 Z96811.1-201ENST00000445880 108 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 AC092991.1-201ENST00000477176 376 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 YWHAEP4-201ENST00000505390 198 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 RNU7-99P-201ENST00000516271 62 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 RN7SKP282-201ENST00000516824 299 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 SNORA31.26-201ENST00000517250 137 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 MIR378D2-201ENST00000580636 98 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 MIR3605-201ENST00000583214 100 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 AC007229.1-201ENST00000590455 412 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 RPL12P50-201ENST00000603116 116 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 AC022202.1-201ENST00000613515 211 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 uc_338.4-201ENST00000616635 176 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 AL136360.1-201ENST00000503377 1900 ntBASIC2.65□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-1082P-201ENST00000364574 107 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-484P-201ENST00000384016 107 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 Y_RNA.432-201ENST00000384087 111 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 RNU2-52P-201ENST00000410680 190 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 AC104389.3-201ENST00000445629 235 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 RNU7-197P-201ENST00000458836 62 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-1211P-201ENST00000459179 105 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 AC096725.1-201ENST00000514266 313 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-1299P-201ENST00000516316 100 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 MIR2681-201ENST00000581814 105 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 AC120024.3-201ENST00000603167 156 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 U6.108-201ENST00000637764 58 ntBASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM48Q8IWZ4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-1154P-201ENST00000391001 104 ntBASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 RNU2-51P-201ENST00000410708 197 ntBASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 RPS15AP28-201ENST00000435088 386 ntBASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 UBBP3-201ENST00000445497 241 ntBASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 SNORD11-201ENST00000459124 84 ntBASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-62P-201ENST00000516526 102 ntBASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 AL359075.3-201ENST00000613288 217 ntBASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM48Q8IWZ4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 Y_RNA.91-201ENST00000363042 107 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 SNORA22C-201ENST00000384614 134 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 AL117342.1-201ENST00000404861 406 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 AC092427.1-202ENST00000430569 476 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 AL109933.2-201ENST00000452651 260 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 AC023449.1-201ENST00000454464 154 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-197P-201ENST00000516680 100 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms