Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 SNORA48.1-201ENST00000390879 135 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 SNORA36B-201ENST00000410438 131 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 RNU4-53P-201ENST00000410828 140 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 MTND2P29-201ENST00000438595 412 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 TRBV12-1-201ENST00000479785 344 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 RPL23AP54-201ENST00000495129 419 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.55□□□□□ -2
LRRTM3Q86VH5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.55□□□□□ -2
LRRTM3Q86VH5 RNU6-1096P-201ENST00000517089 102 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 AC021269.2-201ENST00000532318 330 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 AC121758.2-201ENST00000553271 193 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 AC011921.3-201ENST00000605540 361 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 AC103810.6-201ENST00000606708 136 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 AL365265.1-201ENST00000621045 234 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 AC064859.1-201ENST00000624741 174 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRRTM3Q86VH5 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
LRRTM3Q86VH5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRTM3Q86VH5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LRRTM3Q86VH5 SNORD23.1-201ENST00000408212 104 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 RNA5SP450-201ENST00000411206 102 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 AC091021.1-201ENST00000468051 388 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.54□□□□□ -2
LRRTM3Q86VH5 HMGB3P3-201ENST00000510526 400 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 RNU6-138P-201ENST00000515952 107 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 RNA5SP24-201ENST00000516478 95 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 Y_RNA.700-201ENST00000516806 100 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 RNU2-19P-201ENST00000517288 84 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 IGLV3-17-201ENST00000519099 244 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 MIR6895-201ENST00000613497 78 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
LRRTM3Q86VH5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LRRTM3Q86VH5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRTM3Q86VH5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
LRRTM3Q86VH5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
LRRTM3Q86VH5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LRRTM3Q86VH5 MIR411-201ENST00000362239 96 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 Y_RNA.297-201ENST00000364950 91 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 RNA5SP501-201ENST00000410990 112 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 Z98742.3-201ENST00000418637 326 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.53□□□□□ -2
LRRTM3Q86VH5 RNVU1-2-201ENST00000516326 135 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 RNU6-341P-201ENST00000516973 96 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 AC011604.1-201ENST00000545978 196 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 AC084364.2-201ENST00000546924 395 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 AC091178.2-201ENST00000584401 117 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 Z83818.1-201ENST00000603584 150 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 Y_RNA.802-201ENST00000614892 130 ntBASIC2.53□□□□□ -2
LRRTM3Q86VH5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LRRTM3Q86VH5 AC100821.1-201ENST00000523153 2479 ntBASIC2.52□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.274-201ENST00000364714 101 ntBASIC2.52□□□□□ -2.01
LRRTM3Q86VH5 SNORA8.3-201ENST00000384679 139 ntBASIC2.52□□□□□ -2.01
LRRTM3Q86VH5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LRRTM3Q86VH5 AL138752.1-201ENST00000452964 351 ntBASIC2.52□□□□□ -2.01
LRRTM3Q86VH5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.52□□□□□ -2.01
LRRTM3Q86VH5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.52□□□□□ -2.01
LRRTM3Q86VH5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.52□□□□□ -2.01
LRRTM3Q86VH5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LRRTM3Q86VH5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 MIR367-201ENST00000362299 68 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 SNORA6-201ENST00000384033 151 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 AC233266.1-201ENST00000454518 96 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 RNU6-437P-201ENST00000459408 95 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 RNA5SP281-201ENST00000516504 135 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 AC100767.1-201ENST00000528178 123 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 MIR4724-201ENST00000579485 89 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 MIR5688-201ENST00000580619 83 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 AC242852.1-201ENST00000612151 96 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 AC244015.1-201ENST00000622301 99 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 ZNF658B-202ENST00000615961 3375 ntBASIC2.51□□□□□ -2.01
LRRTM3Q86VH5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 MIR21-201ENST00000362134 72 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 RNU6-653P-201ENST00000363074 106 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 MIR526A2-201ENST00000390198 65 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 AC245047.4-201ENST00000433189 144 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 AC055731.1-201ENST00000474387 401 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 SNORA31.11-201ENST00000516528 139 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 RNU6-1291P-201ENST00000516591 104 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 AL358944.1-201ENST00000528537 144 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 AC012640.5-201ENST00000623897 319 ntBASIC2.5□□□□□ -2.01
LRRTM3Q86VH5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
LRRTM3Q86VH5 RNU6-674P-201ENST00000363831 107 ntBASIC2.49□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.308-201ENST00000365043 101 ntBASIC2.49□□□□□ -2.01
LRRTM3Q86VH5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRTM3Q86VH5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRTM3Q86VH5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LRRTM3Q86VH5 AP002004.2-201ENST00000531656 154 ntBASIC2.49□□□□□ -2.01
LRRTM3Q86VH5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.29-201ENST00000362570 113 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 RNU4-17P-201ENST00000365598 141 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.785-201ENST00000384290 109 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms