Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-578P-201ENST00000390980 103 ntBASIC3.16□□□□□ -1.9
USP48Q86UV5 MIR1262-201ENST00000408276 93 ntBASIC3.16□□□□□ -1.9
USP48Q86UV5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.16□□□□□ -1.9
USP48Q86UV5 AL162725.1-201ENST00000435405 301 ntBASIC3.16□□□□□ -1.9
USP48Q86UV5 RNU1-131P-201ENST00000458943 161 ntBASIC3.16□□□□□ -1.9
USP48Q86UV5 MIR4648-201ENST00000580107 72 ntBASIC3.16□□□□□ -1.9
USP48Q86UV5 MIR4438-201ENST00000585271 93 ntBASIC3.16□□□□□ -1.9
USP48Q86UV5 AC012640.5-201ENST00000623897 319 ntBASIC3.16□□□□□ -1.9
USP48Q86UV5 AC068647.2-201ENST00000637380 353 ntBASIC3.16□□□□□ -1.9
USP48Q86UV5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
USP48Q86UV5 Y_RNA.24-201ENST00000362508 103 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 Y_RNA.293-201ENST00000364908 93 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 SNORD116-13-201ENST00000384408 92 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 RNU6-959P-201ENST00000384671 107 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 MIR569-201ENST00000385228 96 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 Y_RNA.586-201ENST00000391146 98 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 RNA5SP425-201ENST00000410336 112 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 HMGN2P34-201ENST00000437647 269 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 AL353689.1-201ENST00000438895 199 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.15□□□□□ -1.91
USP48Q86UV5 AC011406.1-201ENST00000512440 370 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 IGKV3-31-201ENST00000523109 329 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.15□□□□□ -1.91
USP48Q86UV5 MIR548AI-201ENST00000579940 88 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 MIR4744-201ENST00000581563 82 ntBASIC3.15□□□□□ -1.91
USP48Q86UV5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP48Q86UV5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP48Q86UV5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
USP48Q86UV5 RNU6-1205P-201ENST00000363625 106 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 U8.9-201ENST00000365667 134 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 Y_RNA.488-201ENST00000384403 102 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 RNU6-239P-201ENST00000390990 99 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 AC108210.2-201ENST00000503681 201 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 AC097462.1-201ENST00000514125 324 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 Y_RNA.797-201ENST00000515977 94 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 CYCSP26-201ENST00000534107 320 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 AC005972.2-201ENST00000604690 348 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 MIR548AY-201ENST00000617669 107 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 Y_RNA.778-201ENST00000620203 90 ntBASIC3.14□□□□□ -1.91
USP48Q86UV5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.14□□□□□ -1.91
USP48Q86UV5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP48Q86UV5 snoU2-30.2-201ENST00000362805 70 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 RNU1-22P-201ENST00000363334 158 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 RNU6-151P-201ENST00000364158 107 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 Y_RNA.357-201ENST00000365487 109 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 RNU6-22P-201ENST00000384355 107 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 MTATP6P29-201ENST00000415057 132 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 EBAG9P1-201ENST00000418955 543 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 AL603825.1-201ENST00000438481 80 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.13□□□□□ -1.91
USP48Q86UV5 RN7SKP164-201ENST00000516138 266 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 RNA5SP320-201ENST00000516263 124 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 RNU6-426P-201ENST00000516464 97 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 RNU7-116P-201ENST00000516940 62 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.13□□□□□ -1.91
USP48Q86UV5 DEFB122-202ENST00000569013 197 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 MIR4431-201ENST00000579990 94 ntBASIC3.13□□□□□ -1.91
USP48Q86UV5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
USP48Q86UV5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP48Q86UV5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
USP48Q86UV5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP48Q86UV5 SNORA25.6-201ENST00000364121 118 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 SNORD114-6-201ENST00000364393 72 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 U8.7-201ENST00000364940 136 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RNU6-117P-201ENST00000365415 107 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RNU6-969P-201ENST00000383900 105 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RNU6-144P-201ENST00000383951 107 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RNU6-1323P-201ENST00000384025 107 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RNU6-1117P-201ENST00000384525 104 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 SNORA8.3-201ENST00000384679 139 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RNU6-257P-201ENST00000410238 98 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RN7SKP223-201ENST00000410582 62 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.12□□□□□ -1.91
USP48Q86UV5 AC117454.1-201ENST00000491120 168 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.12□□□□□ -1.91
USP48Q86UV5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.12□□□□□ -1.91
USP48Q86UV5 RNA5SP282-201ENST00000516355 108 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RNU7-115P-201ENST00000516433 55 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RNU6-63P-201ENST00000516690 95 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 RNU7-172P-201ENST00000517125 64 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 AC004486.1-201ENST00000546846 233 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 AL353149.1-201ENST00000610667 244 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.12□□□□□ -1.91
USP48Q86UV5 U6.73-201ENST00000619194 103 ntBASIC3.12□□□□□ -1.91
USP48Q86UV5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP48Q86UV5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP48Q86UV5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.11□□□□□ -1.91
USP48Q86UV5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.11□□□□□ -1.91
USP48Q86UV5 RNU4-13P-201ENST00000364019 141 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 RNA5SP99-201ENST00000364020 114 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 RNU1-91P-201ENST00000364746 163 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 RNU1-109P-201ENST00000383960 147 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 RNU6-417P-201ENST00000384712 107 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 MT-TT-201ENST00000387460 66 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
USP48Q86UV5 AL135786.1-201ENST00000415892 214 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.11□□□□□ -1.91
USP48Q86UV5 RN7SL636P-201ENST00000497504 294 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.11□□□□□ -1.91
USP48Q86UV5 RNU6-561P-201ENST00000516222 102 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms