Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU6-1156P-201ENST00000410365 100 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 Y_RNA.646-201ENST00000410980 101 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.97□□□□□ -2.25
ATL3Q6DD88 AL049830.1-201ENST00000468034 425 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 RNU6-307P-201ENST00000516743 106 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 RNA5SP480-201ENST00000516840 109 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 SNORA70.22-201ENST00000517160 124 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 RNU2-12P-201ENST00000517216 168 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 AP002004.2-201ENST00000531656 154 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 AC055872.1-201ENST00000570978 278 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 RNU6-1188P-201ENST00000363795 107 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 RNU6-961P-201ENST00000363893 105 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 RNU6-1310P-201ENST00000384153 107 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 Y_RNA.474-201ENST00000384341 102 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 RNA5SP482-201ENST00000391269 118 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 AC114482.1-201ENST00000418010 247 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 MTND4P28-201ENST00000426217 387 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 SUMO1P2-201ENST00000452524 304 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 AC093850.1-201ENST00000454121 251 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 MIR2053-201ENST00000459295 91 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 COX6CP14-201ENST00000469580 174 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 MTND4P17-201ENST00000470444 350 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 RNU6-1291P-201ENST00000516591 104 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 RNU6-922P-201ENST00000516753 99 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.96□□□□□ -2.26
ATL3Q6DD88 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
ATL3Q6DD88 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
ATL3Q6DD88 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.96□□□□□ -2.26
ATL3Q6DD88 SNORD115-30-201ENST00000364117 82 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 RNU4-41P-201ENST00000364426 143 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 SNORA2.2-201ENST00000365473 135 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 RNU6-310P-201ENST00000384655 107 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 RNU6-376P-201ENST00000384731 106 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 SNORA75.6-201ENST00000391318 127 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 Y_RNA.592-201ENST00000410274 109 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 Y_RNA.619-201ENST00000410951 90 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 MTND1P2-201ENST00000430604 821 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 AC048334.1-201ENST00000477975 159 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 AC022493.2-201ENST00000506122 481 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 RNU6-408P-201ENST00000515910 100 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 RNU6-1278P-201ENST00000516130 107 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 AL117336.2-201ENST00000602435 335 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 AC004467.1-201ENST00000615678 330 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.95□□□□□ -2.26
ATL3Q6DD88 TPTEP1-208ENST00000636884 213 ntBASIC0.95□□□□□ -2.26
ATL3Q6DD88 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ATL3Q6DD88 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ATL3Q6DD88 Y_RNA.36-201ENST00000362602 112 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 Y_RNA.363-201ENST00000365529 113 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 RNU6-136P-201ENST00000384663 107 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 MIR222-201ENST00000384992 110 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 RNA5SP511-201ENST00000410487 115 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 AC105758.1-201ENST00000506038 399 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.94□□□□□ -2.26
ATL3Q6DD88 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.94□□□□□ -2.26
ATL3Q6DD88 RNU6-63P-201ENST00000516690 95 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 RNU2-56P-201ENST00000516826 190 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.94□□□□□ -2.26
ATL3Q6DD88 AC136443.5-201ENST00000603741 370 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 U6atac.1-201ENST00000616025 117 ntBASIC0.94□□□□□ -2.26
ATL3Q6DD88 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
ATL3Q6DD88 Y_RNA.101-201ENST00000363154 102 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 RNU6-1080P-201ENST00000383982 107 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 MIR520G-201ENST00000385064 90 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 SNORA69.1-201ENST00000390904 137 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 RNU6-1199P-201ENST00000411249 104 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 RPL23AP50-201ENST00000434149 455 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 AC245047.7-201ENST00000440265 293 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 HSPE1P13-201ENST00000451143 297 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 Y_RNA.635-201ENST00000459041 101 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 RPS26P48-201ENST00000491713 339 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 RNU7-12P-201ENST00000516030 62 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 AC023442.1-201ENST00000531247 422 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.93□□□□□ -2.26
ATL3Q6DD88 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.93□□□□□ -2.26
ATL3Q6DD88 RMST_2.1-201ENST00000617263 136 ntBASIC0.93□□□□□ -2.26
ATL3Q6DD88 Y_RNA.112-201ENST00000363250 102 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 RNU6-833P-201ENST00000363486 107 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 SNORD114-22-201ENST00000365423 72 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 RNU6-876P-201ENST00000391295 104 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 AL162725.1-201ENST00000435405 301 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 RNU6-470P-201ENST00000515954 104 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 RNU6-322P-201ENST00000516010 103 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 SNORA31.2-201ENST00000516019 134 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 RNU6-1096P-201ENST00000517089 102 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 RNU6-1116P-201ENST00000517269 99 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.92□□□□□ -2.26
ATL3Q6DD88 MIR5690-201ENST00000583739 73 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 AL357312.1-201ENST00000603879 298 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 PRELID3BP2-201ENST00000605362 201 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 AC138305.3-201ENST00000624988 240 ntBASIC0.92□□□□□ -2.26
ATL3Q6DD88 RNU4-79P-201ENST00000362764 141 ntBASIC0.91□□□□□ -2.26
ATL3Q6DD88 RNY3P4-201ENST00000384428 101 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms